Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AL109618.2-201ENST00000605527 211 ntBASIC2.53□□□□□ -2
EBF4Q9BQW3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
EBF4Q9BQW3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.53□□□□□ -2
EBF4Q9BQW3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.53□□□□□ -2
EBF4Q9BQW3 AC099063.3-201ENST00000642066 185 ntBASIC2.53□□□□□ -2
EBF4Q9BQW3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2
EBF4Q9BQW3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
EBF4Q9BQW3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.53□□□□□ -2
EBF4Q9BQW3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 RNU4-24P-201ENST00000364565 139 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 U8.8-201ENST00000365399 135 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 RNU6-637P-201ENST00000384050 107 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 SNORA36C-201ENST00000384289 132 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 MIR1289-1-201ENST00000408836 144 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 BX682237.1-201ENST00000415016 335 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AC129850.1-201ENST00000436203 508 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AL121871.1-201ENST00000443413 436 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 FAM103A2P-201ENST00000444122 354 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 TPT1P14-201ENST00000448018 505 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 RNA5SP310-201ENST00000459084 116 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 RPL32P34-201ENST00000486380 400 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 SEM1P1-201ENST00000506694 209 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 MTCO3P7-201ENST00000510008 774 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AC091965.2-201ENST00000512324 613 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 RNU6-798P-201ENST00000516912 103 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AP004247.1-201ENST00000531556 1289 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AC079600.2-201ENST00000550076 130 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 ACTR3BP3-201ENST00000565577 979 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AC005951.2-201ENST00000576282 495 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AC060771.1-201ENST00000582031 164 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 MIR548AB-201ENST00000584917 84 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 NBR2-204ENST00000587322 63 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 U73023.1-201ENST00000603134 700 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AC008962.1-201ENST00000605729 304 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 RN7SKP299-201ENST00000606679 301 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AC107214.2-201ENST00000608204 634 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AC009570.1-201ENST00000609599 745 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AP000254.1-201ENST00000609934 520 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AC012150.2-201ENST00000621300 544 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 PABPC1P9-201ENST00000426076 1612 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.52□□□□□ -2.01
EBF4Q9BQW3 MTND5P33-201ENST00000571250 1450 ntBASIC2.52□□□□□ -2.01
EBF4Q9BQW3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
EBF4Q9BQW3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
EBF4Q9BQW3 DEFB108F-201ENST00000344638 222 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 Y_RNA.18-201ENST00000362461 102 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 Y_RNA.77-201ENST00000362962 107 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 RNU1-39P-201ENST00000383897 165 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 SNORD116-4-201ENST00000384733 96 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
EBF4Q9BQW3 U3.20-201ENST00000390909 217 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 MTCYBP36-201ENST00000404146 440 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 HMGB1P11-201ENST00000413899 637 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 CYCSP46-201ENST00000423569 204 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.51□□□□□ -2.01
EBF4Q9BQW3 AC233728.2-201ENST00000425348 757 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 AL353706.1-201ENST00000436728 494 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 AL031667.1-201ENST00000440222 725 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.51□□□□□ -2.01
EBF4Q9BQW3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.51□□□□□ -2.01
EBF4Q9BQW3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.51□□□□□ -2.01
EBF4Q9BQW3 HSPE1P6-201ENST00000479457 291 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 AC109486.1-201ENST00000486833 374 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 AC106872.3-201ENST00000495104 446 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.51□□□□□ -2.01
EBF4Q9BQW3 AC022447.3-201ENST00000506865 495 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 HIGD1AP13-201ENST00000509878 289 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 AC074250.1-201ENST00000511117 192 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.51□□□□□ -2.01
EBF4Q9BQW3 Y_RNA.655-201ENST00000515919 96 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 RNU6-678P-201ENST00000516832 109 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.51□□□□□ -2.01
EBF4Q9BQW3 ERHP1-201ENST00000523006 310 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.51□□□□□ -2.01
EBF4Q9BQW3 DEFB108D-201ENST00000527787 222 ntBASIC2.51□□□□□ -2.01
EBF4Q9BQW3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
EBF4Q9BQW3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.51□□□□□ -2.01
EBF4Q9BQW3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
EBF4Q9BQW3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.51□□□□□ -2.01
EBF4Q9BQW3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms