Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RPPH1-2P-201ENST00000516688 293 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 RNU6-548P-201ENST00000517083 115 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 NRON-201ENST00000517270 370 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.27□□□□□ -2.05
FOXC2Q99958 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
FOXC2Q99958 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.27□□□□□ -2.05
FOXC2Q99958 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.27□□□□□ -2.05
FOXC2Q99958 AC027176.1-201ENST00000560204 514 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.27□□□□□ -2.05
FOXC2Q99958 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
FOXC2Q99958 AC107871.2-201ENST00000612894 502 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 AC109809.1-201ENST00000619665 545 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
FOXC2Q99958 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.27□□□□□ -2.05
FOXC2Q99958 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
FOXC2Q99958 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
FOXC2Q99958 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
FOXC2Q99958 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
FOXC2Q99958 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
FOXC2Q99958 Y_RNA.238-201ENST00000364441 102 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 SNORA23-201ENST00000365128 182 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.26□□□□□ -2.05
FOXC2Q99958 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
FOXC2Q99958 RNU6-1207P-201ENST00000384343 107 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 MIR513B-201ENST00000385136 84 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 AL512633.1-201ENST00000399931 655 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 AL109755.1-201ENST00000401791 649 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 SNORD88.1-201ENST00000408684 91 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.26□□□□□ -2.05
FOXC2Q99958 RNA5SP247-201ENST00000411181 105 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.26□□□□□ -2.05
FOXC2Q99958 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.26□□□□□ -2.05
FOXC2Q99958 AC009963.1-201ENST00000417265 157 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 AC098614.2-201ENST00000426040 255 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 AL356320.1-201ENST00000429616 163 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 GTF2IP20-201ENST00000431663 360 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 AL139415.2-201ENST00000431968 163 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 RPS15AP7-201ENST00000439294 405 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 RPL23AP20-201ENST00000447965 421 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
FOXC2Q99958 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.26□□□□□ -2.05
FOXC2Q99958 SNORD11.1-201ENST00000459482 85 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 AC104563.1-201ENST00000476147 376 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 AC021382.1-201ENST00000483523 359 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 AC020699.1-201ENST00000505161 445 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 RNA5SP282-201ENST00000516355 108 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 SUB1P1-201ENST00000524415 382 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
FOXC2Q99958 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.26□□□□□ -2.05
FOXC2Q99958 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.26□□□□□ -2.05
FOXC2Q99958 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.26□□□□□ -2.05
FOXC2Q99958 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.26□□□□□ -2.05
FOXC2Q99958 AL391261.3-201ENST00000557194 520 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.26□□□□□ -2.05
FOXC2Q99958 AL512347.1-201ENST00000566420 503 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 AGGF1P5-201ENST00000567900 919 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 OR4K7P-201ENST00000580232 945 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 AC007621.1-201ENST00000604544 437 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 AC069234.5-201ENST00000611056 416 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.26□□□□□ -2.05
FOXC2Q99958 AC009268.2-201ENST00000621925 457 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.26□□□□□ -2.05
FOXC2Q99958 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
FOXC2Q99958 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
FOXC2Q99958 AL138713.1-201ENST00000624026 2130 ntBASIC2.26□□□□□ -2.05
FOXC2Q99958 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
FOXC2Q99958 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.26□□□□□ -2.05
FOXC2Q99958 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
FOXC2Q99958 AP000776.1-201ENST00000530032 1663 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
FOXC2Q99958 DDX10P1-201ENST00000448545 1933 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
FOXC2Q99958 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
FOXC2Q99958 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.25□□□□□ -2.05
FOXC2Q99958 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
FOXC2Q99958 MIR26A1-201ENST00000362205 77 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 Y_RNA.465-201ENST00000384293 102 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 MIR512-1-201ENST00000384913 84 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
FOXC2Q99958 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.25□□□□□ -2.05
FOXC2Q99958 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.25□□□□□ -2.05
FOXC2Q99958 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.25□□□□□ -2.05
FOXC2Q99958 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.25□□□□□ -2.05
FOXC2Q99958 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.25□□□□□ -2.05
FOXC2Q99958 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.25□□□□□ -2.05
FOXC2Q99958 ATP5F1P1-201ENST00000433775 569 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 Z80107.1-201ENST00000436830 412 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.25□□□□□ -2.05
FOXC2Q99958 CR769776.1-201ENST00000441254 787 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 USP9YP25-201ENST00000457708 443 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 RPS27AP9-201ENST00000477681 438 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 AC108729.1-201ENST00000487812 947 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 AC022447.3-201ENST00000506865 495 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 CDC42P4-201ENST00000510507 563 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 RNA5SP291-201ENST00000517222 105 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 RNU6-840P-201ENST00000517275 65 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.25□□□□□ -2.05
FOXC2Q99958 HMGN1P28-201ENST00000521340 364 ntBASIC2.25□□□□□ -2.05
FOXC2Q99958 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms