Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LITAFQ99732 Z82217.1-201ENST00000625157 8149 ntBASIC2.68□□□□□ -1.98
LITAFQ99732 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LITAFQ99732 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
LITAFQ99732 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
LITAFQ99732 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
LITAFQ99732 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LITAFQ99732 AC007390.2-201ENST00000606229 3803 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 PNPT1P2-201ENST00000456768 2050 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
LITAFQ99732 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
LITAFQ99732 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LITAFQ99732 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.67□□□□□ -1.98
LITAFQ99732 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LITAFQ99732 UBE2L2-201ENST00000254302 429 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 RNU6-371P-201ENST00000364283 108 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 Y_RNA.259-201ENST00000364619 101 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.67□□□□□ -1.98
LITAFQ99732 Y_RNA.534-201ENST00000384599 112 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 MIR184-201ENST00000384962 84 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 MIR450B-201ENST00000401182 78 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AL391417.1-201ENST00000404100 426 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 RPS4XP7-201ENST00000406274 780 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AC074085.1-201ENST00000413598 418 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC2.67□□□□□ -1.98
LITAFQ99732 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.67□□□□□ -1.98
LITAFQ99732 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.67□□□□□ -1.98
LITAFQ99732 AC091390.3-201ENST00000426478 338 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AL732292.1-201ENST00000426692 226 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 MTCO2P12-201ENST00000427426 682 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AL451062.2-201ENST00000427515 271 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AL358472.1-201ENST00000431295 329 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC2.67□□□□□ -1.98
LITAFQ99732 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.67□□□□□ -1.98
LITAFQ99732 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC2.67□□□□□ -1.98
LITAFQ99732 PTMAP6-201ENST00000439110 327 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AC008264.1-201ENST00000447612 367 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AC107399.1-201ENST00000451226 265 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.67□□□□□ -1.98
LITAFQ99732 Y_RNA.635-201ENST00000459041 101 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 RPL21P41-201ENST00000459863 264 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 VN1R17P-201ENST00000472048 1090 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AC068587.1-201ENST00000483613 781 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.67□□□□□ -1.98
LITAFQ99732 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC2.67□□□□□ -1.98
LITAFQ99732 AC026784.1-201ENST00000507986 352 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.67□□□□□ -1.98
LITAFQ99732 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LITAFQ99732 APOOP4-201ENST00000513530 597 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 RN7SKP13-201ENST00000515933 244 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 RNU6-559P-201ENST00000516151 98 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 SCARNA15.1-201ENST00000516384 125 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 RNU6-1069P-201ENST00000516612 133 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 RNU6ATAC24P-201ENST00000516811 135 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 RNA5SP454-201ENST00000517231 127 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.67□□□□□ -1.98
LITAFQ99732 AP005597.4-201ENST00000526762 229 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.67□□□□□ -1.98
LITAFQ99732 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.67□□□□□ -1.98
LITAFQ99732 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
LITAFQ99732 AL442663.2-201ENST00000554385 511 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AC090877.1-201ENST00000561418 344 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 MIR3921-201ENST00000577308 85 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.67□□□□□ -1.98
LITAFQ99732 MIR3934-201ENST00000579806 107 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 MIR5692C1-201ENST00000585309 91 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AC023043.2-201ENST00000589678 1026 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.67□□□□□ -1.98
LITAFQ99732 AC002545.1-201ENST00000592511 181 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AL161729.3-201ENST00000603533 673 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AL121612.2-201ENST00000612261 482 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 FAM157A-202ENST00000615155 405 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AC087385.3-201ENST00000620477 187 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 AC022418.1-201ENST00000624118 445 ntBASIC2.67□□□□□ -1.98
LITAFQ99732 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC2.67□□□□□ -1.98
LITAFQ99732 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.67□□□□□ -1.98
LITAFQ99732 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.67□□□□□ -1.98
LITAFQ99732 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
LITAFQ99732 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LITAFQ99732 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LITAFQ99732 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LITAFQ99732 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
LITAFQ99732 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC2.66□□□□□ -1.98
LITAFQ99732 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LITAFQ99732 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LITAFQ99732 RNU1-14P-201ENST00000362759 152 ntBASIC2.66□□□□□ -1.98
LITAFQ99732 Y_RNA.138-201ENST00000363462 102 ntBASIC2.66□□□□□ -1.98
LITAFQ99732 Y_RNA.212-201ENST00000364177 102 ntBASIC2.66□□□□□ -1.98
LITAFQ99732 SNORA7.2-201ENST00000364446 145 ntBASIC2.66□□□□□ -1.98
LITAFQ99732 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LITAFQ99732 RNU6-1297P-201ENST00000384415 104 ntBASIC2.66□□□□□ -1.98
LITAFQ99732 RNU6-45P-201ENST00000384471 107 ntBASIC2.66□□□□□ -1.98
LITAFQ99732 snosnR66.1-201ENST00000391095 99 ntBASIC2.66□□□□□ -1.98
LITAFQ99732 RN7SKP158-201ENST00000410453 326 ntBASIC2.66□□□□□ -1.98
LITAFQ99732 COX6B1P1-201ENST00000415962 213 ntBASIC2.66□□□□□ -1.98
LITAFQ99732 AF228730.4-201ENST00000421457 183 ntBASIC2.66□□□□□ -1.98
LITAFQ99732 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.66□□□□□ -1.98
LITAFQ99732 RPS6P12-201ENST00000432491 726 ntBASIC2.66□□□□□ -1.98
LITAFQ99732 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.66□□□□□ -1.98
LITAFQ99732 HMGB1P37-201ENST00000439613 609 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms