Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.79□□□□□ -2.28
COL12A1Q99715 RPS20P10-201ENST00000451209 253 ntBASIC0.79□□□□□ -2.28
COL12A1Q99715 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.79□□□□□ -2.28
COL12A1Q99715 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.79□□□□□ -2.28
COL12A1Q99715 RNU6-1334P-201ENST00000516032 105 ntBASIC0.79□□□□□ -2.28
COL12A1Q99715 AC002550.2-201ENST00000621246 394 ntBASIC0.79□□□□□ -2.28
COL12A1Q99715 MIR6759-201ENST00000638110 65 ntBASIC0.79□□□□□ -2.28
COL12A1Q99715 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
COL12A1Q99715 MTND4P34-201ENST00000572715 1371 ntBASIC0.79□□□□□ -2.28
COL12A1Q99715 MIR1265-201ENST00000408444 86 ntBASIC0.79□□□□□ -2.28
COL12A1Q99715 ZNF90P2-204ENST00000419323 1075 ntBASIC0.79□□□□□ -2.28
COL12A1Q99715 MTCO3P46-201ENST00000425787 232 ntBASIC0.79□□□□□ -2.28
COL12A1Q99715 MTND5P25-201ENST00000430499 799 ntBASIC0.79□□□□□ -2.28
COL12A1Q99715 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC0.79□□□□□ -2.28
COL12A1Q99715 Z96811.1-201ENST00000445880 108 ntBASIC0.79□□□□□ -2.28
COL12A1Q99715 AC239798.3-201ENST00000454459 408 ntBASIC0.79□□□□□ -2.28
COL12A1Q99715 FO393415.2-201ENST00000480085 343 ntBASIC0.79□□□□□ -2.28
COL12A1Q99715 AC023050.2-201ENST00000544968 387 ntBASIC0.79□□□□□ -2.28
COL12A1Q99715 BNIP3P26-201ENST00000600827 554 ntBASIC0.79□□□□□ -2.28
COL12A1Q99715 RNA5SP276-201ENST00000362580 94 ntBASIC0.78□□□□□ -2.28
COL12A1Q99715 RNU1-62P-201ENST00000362599 164 ntBASIC0.78□□□□□ -2.28
COL12A1Q99715 AC015922.2-201ENST00000435593 184 ntBASIC0.78□□□□□ -2.28
COL12A1Q99715 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
COL12A1Q99715 RPL26P9-201ENST00000457466 433 ntBASIC0.78□□□□□ -2.28
COL12A1Q99715 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.78□□□□□ -2.28
COL12A1Q99715 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.78□□□□□ -2.28
COL12A1Q99715 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.78□□□□□ -2.28
COL12A1Q99715 RPS15AP11-201ENST00000594193 385 ntBASIC0.78□□□□□ -2.28
COL12A1Q99715 AC084373.1-201ENST00000603311 235 ntBASIC0.78□□□□□ -2.28
COL12A1Q99715 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.78□□□□□ -2.28
COL12A1Q99715 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.78□□□□□ -2.28
COL12A1Q99715 MIR203B-201ENST00000636080 86 ntBASIC0.78□□□□□ -2.28
COL12A1Q99715 AL137003.2-201ENST00000606924 2538 ntBASIC0.78□□□□□ -2.28
COL12A1Q99715 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
COL12A1Q99715 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
COL12A1Q99715 AL591704.2-201ENST00000421658 181 ntBASIC0.78□□□□□ -2.28
COL12A1Q99715 AC008379.1-201ENST00000463655 464 ntBASIC0.78□□□□□ -2.28
COL12A1Q99715 AC083923.1-201ENST00000523708 376 ntBASIC0.78□□□□□ -2.28
COL12A1Q99715 RLIMP2-201ENST00000427891 1563 ntBASIC0.78□□□□□ -2.28
COL12A1Q99715 AC099654.7-201ENST00000635788 2127 ntBASIC0.78□□□□□ -2.29
COL12A1Q99715 RNA5SP189-201ENST00000364920 115 ntBASIC0.78□□□□□ -2.29
COL12A1Q99715 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.78□□□□□ -2.29
COL12A1Q99715 RPL21P90-201ENST00000415692 466 ntBASIC0.78□□□□□ -2.29
COL12A1Q99715 AL627224.1-201ENST00000448334 444 ntBASIC0.78□□□□□ -2.29
COL12A1Q99715 RBM43P1-201ENST00000476891 1081 ntBASIC0.78□□□□□ -2.29
COL12A1Q99715 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC0.78□□□□□ -2.29
COL12A1Q99715 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.78□□□□□ -2.29
COL12A1Q99715 AC073544.1-201ENST00000600110 1595 ntBASIC0.78□□□□□ -2.29
COL12A1Q99715 YWHAQP7-201ENST00000603536 658 ntBASIC0.78□□□□□ -2.29
COL12A1Q99715 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.77□□□□□ -2.29
COL12A1Q99715 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
COL12A1Q99715 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
COL12A1Q99715 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
COL12A1Q99715 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
COL12A1Q99715 RNA5SP498-201ENST00000411342 120 ntBASIC0.77□□□□□ -2.29
COL12A1Q99715 OR6C66P-201ENST00000414917 930 ntBASIC0.77□□□□□ -2.29
COL12A1Q99715 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.77□□□□□ -2.29
COL12A1Q99715 RAB9AP5-201ENST00000437794 597 ntBASIC0.77□□□□□ -2.29
COL12A1Q99715 RAB9AP2-201ENST00000443911 597 ntBASIC0.77□□□□□ -2.29
COL12A1Q99715 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.77□□□□□ -2.29
COL12A1Q99715 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.77□□□□□ -2.29
COL12A1Q99715 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
COL12A1Q99715 NOP56P3-201ENST00000549457 385 ntBASIC0.77□□□□□ -2.29
COL12A1Q99715 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
COL12A1Q99715 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
COL12A1Q99715 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.77□□□□□ -2.29
COL12A1Q99715 DBF4P1-201ENST00000412976 1892 ntBASIC0.77□□□□□ -2.29
COL12A1Q99715 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
COL12A1Q99715 MTND5P11-201ENST00000511037 1812 ntBASIC0.77□□□□□ -2.29
COL12A1Q99715 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.77□□□□□ -2.29
COL12A1Q99715 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.77□□□□□ -2.29
COL12A1Q99715 AL136380.1-201ENST00000447970 162 ntBASIC0.77□□□□□ -2.29
COL12A1Q99715 AC020658.4-201ENST00000613987 684 ntBASIC0.77□□□□□ -2.29
COL12A1Q99715 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.77□□□□□ -2.29
COL12A1Q99715 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.77□□□□□ -2.29
COL12A1Q99715 OR4G3P-201ENST00000633500 913 ntBASIC0.77□□□□□ -2.29
COL12A1Q99715 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
COL12A1Q99715 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
COL12A1Q99715 Y_RNA.18-201ENST00000362461 102 ntBASIC0.76□□□□□ -2.29
COL12A1Q99715 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.76□□□□□ -2.29
COL12A1Q99715 AF279873.1-201ENST00000523393 313 ntBASIC0.76□□□□□ -2.29
COL12A1Q99715 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.76□□□□□ -2.29
COL12A1Q99715 MTRNR2L2-201ENST00000604882 87 ntBASIC0.76□□□□□ -2.29
COL12A1Q99715 AC091304.6-201ENST00000619761 202 ntBASIC0.76□□□□□ -2.29
COL12A1Q99715 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.76□□□□□ -2.29
COL12A1Q99715 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.76□□□□□ -2.29
COL12A1Q99715 MIR329-2-201ENST00000385029 84 ntBASIC0.76□□□□□ -2.29
COL12A1Q99715 MRPS33P3-201ENST00000513456 322 ntBASIC0.76□□□□□ -2.29
COL12A1Q99715 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.76□□□□□ -2.29
COL12A1Q99715 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.76□□□□□ -2.29
COL12A1Q99715 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.76□□□□□ -2.29
COL12A1Q99715 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
COL12A1Q99715 RNU6-1320P-201ENST00000390838 107 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 RNU6-1269P-201ENST00000391139 107 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 PRELID3BP11-201ENST00000414230 479 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.75□□□□□ -2.29
COL12A1Q99715 AC106901.1-201ENST00000425086 698 ntBASIC0.75□□□□□ -2.29
COL12A1Q99715 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.75□□□□□ -2.29
COL12A1Q99715 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.75□□□□□ -2.29
COL12A1Q99715 RNU6-599P-201ENST00000459383 107 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms