Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC074029.2-201ENST00000551045 634 ntBASIC0.79□□□□□ -2.28
SPENQ96T58 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.79□□□□□ -2.28
SPENQ96T58 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.79□□□□□ -2.28
SPENQ96T58 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.79□□□□□ -2.28
SPENQ96T58 RNY4P3-201ENST00000365254 95 ntBASIC0.78□□□□□ -2.28
SPENQ96T58 RNU6-997P-201ENST00000384725 107 ntBASIC0.78□□□□□ -2.28
SPENQ96T58 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC0.78□□□□□ -2.28
SPENQ96T58 RPL26P9-201ENST00000457466 433 ntBASIC0.78□□□□□ -2.28
SPENQ96T58 SNORA48.9-201ENST00000516419 162 ntBASIC0.78□□□□□ -2.28
SPENQ96T58 SNORD59.2-201ENST00000516873 68 ntBASIC0.78□□□□□ -2.28
SPENQ96T58 AC090897.2-201ENST00000581715 130 ntBASIC0.78□□□□□ -2.28
SPENQ96T58 AC012443.1-201ENST00000605605 231 ntBASIC0.78□□□□□ -2.28
SPENQ96T58 AC009318.3-201ENST00000616916 503 ntBASIC0.78□□□□□ -2.28
SPENQ96T58 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
SPENQ96T58 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
SPENQ96T58 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
SPENQ96T58 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
SPENQ96T58 RPL23AP32-201ENST00000395315 459 ntBASIC0.78□□□□□ -2.28
SPENQ96T58 OR6C66P-201ENST00000414917 930 ntBASIC0.78□□□□□ -2.28
SPENQ96T58 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.78□□□□□ -2.28
SPENQ96T58 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.78□□□□□ -2.28
SPENQ96T58 DPRXP5-201ENST00000604662 539 ntBASIC0.78□□□□□ -2.28
SPENQ96T58 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SPENQ96T58 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.78□□□□□ -2.28
SPENQ96T58 MTND4P27-201ENST00000450813 1354 ntBASIC0.78□□□□□ -2.28
SPENQ96T58 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.78□□□□□ -2.28
SPENQ96T58 AL136520.1-201ENST00000600311 1322 ntBASIC0.78□□□□□ -2.28
SPENQ96T58 RNU6-1235P-201ENST00000384559 107 ntBASIC0.78□□□□□ -2.29
SPENQ96T58 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.78□□□□□ -2.29
SPENQ96T58 TRAPPC2P5-201ENST00000426293 308 ntBASIC0.78□□□□□ -2.29
SPENQ96T58 RPS29P28-201ENST00000446439 141 ntBASIC0.78□□□□□ -2.29
SPENQ96T58 SNORD97-201ENST00000459187 142 ntBASIC0.78□□□□□ -2.29
SPENQ96T58 RNU6-498P-201ENST00000459468 107 ntBASIC0.78□□□□□ -2.29
SPENQ96T58 RPS15AP11-201ENST00000594193 385 ntBASIC0.78□□□□□ -2.29
SPENQ96T58 MRPL42P6-201ENST00000486397 371 ntBASIC0.77□□□□□ -2.29
SPENQ96T58 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SPENQ96T58 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
SPENQ96T58 SSXP4-201ENST00000451349 245 ntBASIC0.77□□□□□ -2.29
SPENQ96T58 AL035407.2-201ENST00000454090 378 ntBASIC0.77□□□□□ -2.29
SPENQ96T58 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC0.77□□□□□ -2.29
SPENQ96T58 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.77□□□□□ -2.29
SPENQ96T58 AC146944.4-201ENST00000602697 718 ntBASIC0.77□□□□□ -2.29
SPENQ96T58 HMGB1P24-202ENST00000615653 685 ntBASIC0.77□□□□□ -2.29
SPENQ96T58 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.77□□□□□ -2.29
SPENQ96T58 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.77□□□□□ -2.29
SPENQ96T58 AL050343.2-201ENST00000607338 280 ntBASIC0.77□□□□□ -2.29
SPENQ96T58 MIR409-201ENST00000362237 79 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 MIR524-201ENST00000385242 87 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 AL355497.1-201ENST00000406262 551 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 UBE2FP3-201ENST00000436366 524 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 MTND4LP12-201ENST00000448237 295 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 ARPC3P2-201ENST00000457786 533 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 AC098583.1-201ENST00000480875 255 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 MTCO1P47-201ENST00000523889 1271 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.76□□□□□ -2.29
SPENQ96T58 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.76□□□□□ -2.29
SPENQ96T58 AC091932.3-201ENST00000624223 323 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.76□□□□□ -2.29
SPENQ96T58 RPS20P15-201ENST00000412792 311 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.76□□□□□ -2.29
SPENQ96T58 AL022238.1-201ENST00000442557 355 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 AC234775.1-201ENST00000454247 670 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 RNA5SP310-201ENST00000459084 116 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 AC104472.2-201ENST00000469035 601 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.76□□□□□ -2.29
SPENQ96T58 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.76□□□□□ -2.29
SPENQ96T58 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.76□□□□□ -2.29
SPENQ96T58 MIR5194-201ENST00000582634 120 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 AC140725.3-201ENST00000616193 880 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 MTND4P34-201ENST00000572715 1371 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SPENQ96T58 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.76□□□□□ -2.29
SPENQ96T58 MRPS17P9-201ENST00000511924 393 ntBASIC0.76□□□□□ -2.29
SPENQ96T58 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.76□□□□□ -2.29
SPENQ96T58 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.76□□□□□ -2.29
SPENQ96T58 RNU1-62P-201ENST00000362599 164 ntBASIC0.75□□□□□ -2.29
SPENQ96T58 SNORA67.1-201ENST00000364749 141 ntBASIC0.75□□□□□ -2.29
SPENQ96T58 SNORA23-201ENST00000365128 182 ntBASIC0.75□□□□□ -2.29
SPENQ96T58 AP000567.1-201ENST00000406413 156 ntBASIC0.75□□□□□ -2.29
SPENQ96T58 HSPE1P1-201ENST00000421494 318 ntBASIC0.75□□□□□ -2.29
SPENQ96T58 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.75□□□□□ -2.29
SPENQ96T58 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.75□□□□□ -2.29
SPENQ96T58 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.75□□□□□ -2.29
SPENQ96T58 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.75□□□□□ -2.29
SPENQ96T58 AP000254.1-201ENST00000609934 520 ntBASIC0.75□□□□□ -2.29
SPENQ96T58 CFTRP2-201ENST00000634304 199 ntBASIC0.75□□□□□ -2.29
SPENQ96T58 NACAP2-201ENST00000318548 624 ntBASIC0.75□□□□□ -2.29
SPENQ96T58 RNA5SP492-201ENST00000411330 114 ntBASIC0.75□□□□□ -2.29
SPENQ96T58 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.75□□□□□ -2.29
SPENQ96T58 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SPENQ96T58 AL627224.1-201ENST00000448334 444 ntBASIC0.75□□□□□ -2.29
SPENQ96T58 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.75□□□□□ -2.29
SPENQ96T58 RNU2-44P-201ENST00000516795 194 ntBASIC0.75□□□□□ -2.29
SPENQ96T58 RNU6-288P-201ENST00000363690 104 ntBASIC0.75□□□□□ -2.29
SPENQ96T58 MIR1265-201ENST00000408444 86 ntBASIC0.75□□□□□ -2.29
SPENQ96T58 RNU2-41P-201ENST00000410991 178 ntBASIC0.75□□□□□ -2.29
SPENQ96T58 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
SPENQ96T58 AC125611.2-201ENST00000551907 647 ntBASIC0.75□□□□□ -2.29
SPENQ96T58 RNU2-40P-201ENST00000410833 196 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms