Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 RPS4XP11-201ENST00000446897 772 ntBASIC1.64□□□□□ -2.15
CDK5RAP2Q96SN8 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.64□□□□□ -2.15
CDK5RAP2Q96SN8 AC096571.1-202ENST00000506634 735 ntBASIC1.64□□□□□ -2.15
CDK5RAP2Q96SN8 AC090821.2-201ENST00000523552 176 ntBASIC1.64□□□□□ -2.15
CDK5RAP2Q96SN8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.64□□□□□ -2.15
CDK5RAP2Q96SN8 CASP1P1-201ENST00000526345 212 ntBASIC1.64□□□□□ -2.15
CDK5RAP2Q96SN8 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.64□□□□□ -2.15
CDK5RAP2Q96SN8 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.64□□□□□ -2.15
CDK5RAP2Q96SN8 AC005498.1-201ENST00000592125 465 ntBASIC1.64□□□□□ -2.15
CDK5RAP2Q96SN8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.64□□□□□ -2.15
CDK5RAP2Q96SN8 AC078899.2-201ENST00000595282 212 ntBASIC1.64□□□□□ -2.15
CDK5RAP2Q96SN8 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.64□□□□□ -2.15
CDK5RAP2Q96SN8 MTCO1P4-201ENST00000520516 1409 ntBASIC1.64□□□□□ -2.15
CDK5RAP2Q96SN8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
CDK5RAP2Q96SN8 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 MTND4P8-201ENST00000514997 1362 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 HMGB1P5-201ENST00000255320 642 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 RNU6-461P-201ENST00000364195 107 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 PGBD4P6-201ENST00000421501 610 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 FO393419.3-201ENST00000428741 282 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AL512661.1-201ENST00000434586 1253 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 TRGVB-201ENST00000453257 471 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AL121594.1-201ENST00000475906 575 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 EIF4EP5-201ENST00000528228 640 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 NDUFS5P6-201ENST00000529136 295 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 MIR4287-201ENST00000579398 78 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AC055876.5-201ENST00000605667 259 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AP002826.1-201ENST00000608835 315 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 RNU6-730P-201ENST00000383954 104 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 UBE2V1P9-201ENST00000414760 368 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AL360221.1-201ENST00000445989 335 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AC105252.1-201ENST00000503089 286 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AC034244.1-201ENST00000507687 207 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 NDUFB4P2-201ENST00000509515 391 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 RNA5SP61-201ENST00000516453 100 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 RNU6-1282P-201ENST00000516735 96 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 MIR3921-201ENST00000577308 85 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 MIR3199-1-201ENST00000582434 88 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AC011374.2-201ENST00000607135 526 ntBASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.63□□□□□ -2.15
CDK5RAP2Q96SN8 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CDK5RAP2Q96SN8 TPTE2P4-201ENST00000258589 1605 ntBASIC1.62□□□□□ -2.15
CDK5RAP2Q96SN8 SNORA46.1-201ENST00000391069 153 ntBASIC1.62□□□□□ -2.15
CDK5RAP2Q96SN8 DSTNP4-201ENST00000399472 474 ntBASIC1.62□□□□□ -2.15
CDK5RAP2Q96SN8 MICF-203ENST00000432679 129 ntBASIC1.62□□□□□ -2.15
CDK5RAP2Q96SN8 MTCO1P48-201ENST00000448024 1096 ntBASIC1.62□□□□□ -2.15
CDK5RAP2Q96SN8 HMGN2P18-201ENST00000450680 270 ntBASIC1.62□□□□□ -2.15
CDK5RAP2Q96SN8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.62□□□□□ -2.15
CDK5RAP2Q96SN8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.62□□□□□ -2.15
CDK5RAP2Q96SN8 RNU6-491P-201ENST00000516099 110 ntBASIC1.62□□□□□ -2.15
CDK5RAP2Q96SN8 C1DP5-201ENST00000525775 383 ntBASIC1.62□□□□□ -2.15
CDK5RAP2Q96SN8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.62□□□□□ -2.15
CDK5RAP2Q96SN8 AC021749.1-201ENST00000604322 607 ntBASIC1.62□□□□□ -2.15
CDK5RAP2Q96SN8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.62□□□□□ -2.15
CDK5RAP2Q96SN8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CDK5RAP2Q96SN8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 RNU6-582P-201ENST00000362989 107 ntBASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 MT-TC-201ENST00000387405 66 ntBASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 ZNF90P2-204ENST00000419323 1075 ntBASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 USP12PX-201ENST00000432383 1057 ntBASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 SDCBPP1-201ENST00000440192 890 ntBASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 AC097493.1-201ENST00000463958 372 ntBASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 AC098657.3-201ENST00000620434 263 ntBASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 AP006248.3-201ENST00000623580 594 ntBASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.61□□□□□ -2.15
CDK5RAP2Q96SN8 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
CDK5RAP2Q96SN8 AL590084.1-201ENST00000407885 387 ntBASIC1.6□□□□□ -2.15
CDK5RAP2Q96SN8 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.6□□□□□ -2.15
CDK5RAP2Q96SN8 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.6□□□□□ -2.15
CDK5RAP2Q96SN8 RPL27AP8-201ENST00000424277 446 ntBASIC1.6□□□□□ -2.15
CDK5RAP2Q96SN8 AL365400.1-201ENST00000431854 640 ntBASIC1.6□□□□□ -2.15
CDK5RAP2Q96SN8 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.6□□□□□ -2.15
CDK5RAP2Q96SN8 AC004022.1-201ENST00000447766 1066 ntBASIC1.6□□□□□ -2.15
CDK5RAP2Q96SN8 ANKRD26P4-201ENST00000455755 950 ntBASIC1.6□□□□□ -2.15
CDK5RAP2Q96SN8 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.6□□□□□ -2.15
CDK5RAP2Q96SN8 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms