Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RNA5SP384-201ENST00000516615 116 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 IGKV2D-36-201ENST00000518643 226 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 TRAV8-5-201ENST00000537369 341 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 GNAI2P1-201ENST00000541815 315 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 AL591034.3-201ENST00000605511 685 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 AC140479.6-201ENST00000633535 357 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 AC015813.6-201ENST00000624409 5808 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 AC103710.2-202ENST00000641454 2853 ntBASIC5.06□□□□□ -1.6
SYNGAP1Q96PV0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 MIR383-201ENST00000362257 73 ntBASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 Y_RNA.257-201ENST00000364596 102 ntBASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 RNU6-1279P-201ENST00000383917 103 ntBASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 RNU6-214P-201ENST00000384130 107 ntBASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 RNU6-95P-201ENST00000384697 107 ntBASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 MIR200C-201ENST00000384980 68 ntBASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 MIR3065-201ENST00000390137 79 ntBASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 RPL7P37-201ENST00000425095 738 ntBASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 AC026801.1-201ENST00000497178 464 ntBASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 Y_RNA.689-201ENST00000516589 107 ntBASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 SETP7-201ENST00000552169 453 ntBASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 BPIFA4P-203ENST00000603168 689 ntBASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 MIR6891-201ENST00000618788 93 ntBASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SYNGAP1Q96PV0 AC074029.4-201ENST00000624796 1859 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 SNORD62.1-201ENST00000362541 86 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 Y_RNA.152-201ENST00000363578 100 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 MIR7-3-201ENST00000384898 110 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 RNU6-754P-201ENST00000391166 107 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 RNU6-1109P-201ENST00000391187 107 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 AC097374.1-203ENST00000400783 485 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 CYCSP19-201ENST00000411715 316 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 RPL23AP69-201ENST00000431134 458 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 AC007389.2-201ENST00000434630 306 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 AC012671.1-201ENST00000451912 203 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 RPL7P49-201ENST00000471402 708 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 AC010631.1-201ENST00000474150 156 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 AP000926.1-201ENST00000479573 241 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 AC114801.2-201ENST00000503825 781 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 AC096745.1-201ENST00000509945 370 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 AC021146.3-201ENST00000511911 260 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 RNU2-69P-201ENST00000516061 100 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 RNU6-1143P-201ENST00000516125 104 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 RNU6-307P-201ENST00000516743 106 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 AC026470.2-201ENST00000561492 181 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 AC079587.1-201ENST00000603846 277 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 TUG1_2.1-201ENST00000614234 87 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 MAPK10-286ENST00000641208 8747 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 DDX10P1-201ENST00000448545 1933 ntBASIC5.04□□□□□ -1.6
SYNGAP1Q96PV0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SYNGAP1Q96PV0 RNU6-293P-201ENST00000411259 106 ntBASIC5.03□□□□□ -1.6
SYNGAP1Q96PV0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNGAP1Q96PV0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms