Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC091390.3-201ENST00000426478 338 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 GTF2IP3-201ENST00000433887 494 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 RPL23AP6-201ENST00000446637 472 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 AL136380.1-201ENST00000447970 162 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 RN7SL807P-201ENST00000470923 297 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 HMGB1P28-201ENST00000507778 552 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 AC074250.1-201ENST00000511117 192 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 MIR4299-201ENST00000577899 72 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 AC243773.3-201ENST00000613270 256 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 AL450472.3-201ENST00000615578 367 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 AC104985.3-201ENST00000623479 597 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 OR1S1-201ENST00000624470 978 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 OR8B1P-202ENST00000641132 1178 ntBASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
PKNOX2Q96KN3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.58□□□□□ -2
PKNOX2Q96KN3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.58□□□□□ -2
PKNOX2Q96KN3 MIR23B-201ENST00000384832 97 ntBASIC2.58□□□□□ -2
PKNOX2Q96KN3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.58□□□□□ -2
PKNOX2Q96KN3 USP9YP20-201ENST00000419224 558 ntBASIC2.58□□□□□ -2
PKNOX2Q96KN3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.58□□□□□ -2
PKNOX2Q96KN3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.58□□□□□ -2
PKNOX2Q96KN3 BNIP3P2-201ENST00000441221 577 ntBASIC2.58□□□□□ -2
PKNOX2Q96KN3 AL513328.1-201ENST00000446460 224 ntBASIC2.58□□□□□ -2
PKNOX2Q96KN3 RPL36AP51-201ENST00000487216 318 ntBASIC2.58□□□□□ -2
PKNOX2Q96KN3 RN7SL274P-201ENST00000492268 272 ntBASIC2.58□□□□□ -2
PKNOX2Q96KN3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.58□□□□□ -2
PKNOX2Q96KN3 RN7SKP132-201ENST00000516001 208 ntBASIC2.58□□□□□ -2
PKNOX2Q96KN3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.58□□□□□ -2
PKNOX2Q96KN3 CBX3P7-201ENST00000532876 502 ntBASIC2.58□□□□□ -2
PKNOX2Q96KN3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.58□□□□□ -2
PKNOX2Q96KN3 MIR3935-201ENST00000583472 104 ntBASIC2.58□□□□□ -2
PKNOX2Q96KN3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.58□□□□□ -2
PKNOX2Q96KN3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.58□□□□□ -2
PKNOX2Q96KN3 AL606834.3-201ENST00000602615 496 ntBASIC2.58□□□□□ -2
PKNOX2Q96KN3 AC123767.1-202ENST00000620407 817 ntBASIC2.58□□□□□ -2
PKNOX2Q96KN3 ELF2P3-201ENST00000445099 1506 ntBASIC2.58□□□□□ -2
PKNOX2Q96KN3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
PKNOX2Q96KN3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.57□□□□□ -2
PKNOX2Q96KN3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.57□□□□□ -2
PKNOX2Q96KN3 MIR34B-201ENST00000385076 84 ntBASIC2.57□□□□□ -2
PKNOX2Q96KN3 SNORA40.2-201ENST00000390847 128 ntBASIC2.57□□□□□ -2
PKNOX2Q96KN3 AC068533.2-201ENST00000411872 306 ntBASIC2.57□□□□□ -2
PKNOX2Q96KN3 AL158823.1-201ENST00000418441 478 ntBASIC2.57□□□□□ -2
PKNOX2Q96KN3 MTCO2P5-201ENST00000422621 426 ntBASIC2.57□□□□□ -2
PKNOX2Q96KN3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.57□□□□□ -2
PKNOX2Q96KN3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.57□□□□□ -2
PKNOX2Q96KN3 MTCYBP45-201ENST00000435243 565 ntBASIC2.57□□□□□ -2
PKNOX2Q96KN3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.57□□□□□ -2
PKNOX2Q96KN3 BX510359.1-201ENST00000456973 237 ntBASIC2.57□□□□□ -2
PKNOX2Q96KN3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.57□□□□□ -2
PKNOX2Q96KN3 AC087884.1-201ENST00000469738 328 ntBASIC2.57□□□□□ -2
PKNOX2Q96KN3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.57□□□□□ -2
PKNOX2Q96KN3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.57□□□□□ -2
PKNOX2Q96KN3 AC112673.1-201ENST00000513168 575 ntBASIC2.57□□□□□ -2
PKNOX2Q96KN3 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.57□□□□□ -2
PKNOX2Q96KN3 AC079600.2-201ENST00000550076 130 ntBASIC2.57□□□□□ -2
PKNOX2Q96KN3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.57□□□□□ -2
PKNOX2Q96KN3 MIR3126-201ENST00000577443 74 ntBASIC2.57□□□□□ -2
PKNOX2Q96KN3 MIR3944-201ENST00000581277 108 ntBASIC2.57□□□□□ -2
PKNOX2Q96KN3 MIR4444-1-201ENST00000581696 74 ntBASIC2.57□□□□□ -2
PKNOX2Q96KN3 MIR4444-2-201ENST00000584390 74 ntBASIC2.57□□□□□ -2
PKNOX2Q96KN3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.57□□□□□ -2
PKNOX2Q96KN3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.57□□□□□ -2
PKNOX2Q96KN3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.57□□□□□ -2
PKNOX2Q96KN3 AL356473.1-201ENST00000406203 1408 ntBASIC2.57□□□□□ -2
PKNOX2Q96KN3 ZNF702P-202ENST00000434269 1966 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.56□□□□□ -2
PKNOX2Q96KN3 SNORA71.3-201ENST00000362582 128 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 RNU1-91P-201ENST00000364746 163 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 Y_RNA.408-201ENST00000383987 102 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 RNU6-1122P-201ENST00000384449 107 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 AL138885.1-201ENST00000405921 675 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 RPS24P7-201ENST00000416921 246 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.56□□□□□ -2
PKNOX2Q96KN3 AL512649.1-201ENST00000428997 581 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.56□□□□□ -2
PKNOX2Q96KN3 THAP5P1-201ENST00000439089 262 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.56□□□□□ -2
PKNOX2Q96KN3 RPL7P49-201ENST00000471402 708 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.56□□□□□ -2
PKNOX2Q96KN3 AC113347.3-201ENST00000509113 148 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.56□□□□□ -2
PKNOX2Q96KN3 AC017037.2-201ENST00000513850 890 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.56□□□□□ -2
PKNOX2Q96KN3 RNU6-583P-201ENST00000516012 92 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 RNA5SP291-201ENST00000517222 105 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 OR5AL2P-201ENST00000532185 920 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 OR11H5P-201ENST00000554039 926 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.56□□□□□ -2
PKNOX2Q96KN3 AC243960.4-201ENST00000600532 288 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 AL390208.1-201ENST00000605885 644 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 AC067747.1-201ENST00000608026 250 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 DUXAP10-204ENST00000612052 616 ntBASIC2.56□□□□□ -2
PKNOX2Q96KN3 AL158163.2-201ENST00000619110 700 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms