Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.84□□□□□ -1.47
LRCH3Q96II8 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRCH3Q96II8 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRCH3Q96II8 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRCH3Q96II8 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
LRCH3Q96II8 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.48
LRCH3Q96II8 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
LRCH3Q96II8 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
LRCH3Q96II8 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRCH3Q96II8 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRCH3Q96II8 AL365440.1-201ENST00000436135 2167 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LRCH3Q96II8 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRCH3Q96II8 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRCH3Q96II8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.83□□□□□ -1.48
LRCH3Q96II8 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
LRCH3Q96II8 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LRCH3Q96II8 MIR412-201ENST00000362142 91 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 RNA5SP197-201ENST00000363357 119 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 SNORA22-201ENST00000383907 134 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 RNU6-1144P-201ENST00000384247 104 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 AL022722.2-201ENST00000402519 180 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 RNU6-1025P-201ENST00000410629 104 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.83□□□□□ -1.48
LRCH3Q96II8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.83□□□□□ -1.48
LRCH3Q96II8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.83□□□□□ -1.48
LRCH3Q96II8 SNORA84-201ENST00000459229 133 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 RPL23AP75-201ENST00000491601 451 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 DUTP1-201ENST00000493631 470 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 Y_RNA.797-201ENST00000515977 94 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 RNU6-168P-201ENST00000516189 101 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 RNU6-191P-201ENST00000516295 94 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 RNU6-143P-201ENST00000516942 93 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 SCARNA16.4-201ENST00000516956 187 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 RNA5SP471-201ENST00000516971 106 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 AC133555.2-201ENST00000550213 292 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 AC126615.2-201ENST00000553003 515 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.83□□□□□ -1.48
LRCH3Q96II8 AL645944.1-201ENST00000603857 493 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 AC011603.4-201ENST00000611325 277 ntBASIC5.83□□□□□ -1.48
LRCH3Q96II8 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LRCH3Q96II8 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRCH3Q96II8 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRCH3Q96II8 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRCH3Q96II8 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRCH3Q96II8 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRCH3Q96II8 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.83□□□□□ -1.48
LRCH3Q96II8 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.83□□□□□ -1.48
LRCH3Q96II8 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.83□□□□□ -1.48
LRCH3Q96II8 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.83□□□□□ -1.48
LRCH3Q96II8 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
LRCH3Q96II8 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.82□□□□□ -1.48
LRCH3Q96II8 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LRCH3Q96II8 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
LRCH3Q96II8 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.82□□□□□ -1.48
LRCH3Q96II8 FTLP6-201ENST00000355274 422 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 RNU4-80P-201ENST00000363200 141 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 RNU6-1155P-201ENST00000363554 107 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 RNU6-512P-201ENST00000364438 103 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 MIR32-201ENST00000384965 70 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 U3.22-201ENST00000391120 215 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 RNU2-43P-201ENST00000410306 190 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 TMEM183AP1-205ENST00000432739 290 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 AURKAPS2-201ENST00000454983 333 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 RPS23P2-201ENST00000463671 415 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.82□□□□□ -1.48
LRCH3Q96II8 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.82□□□□□ -1.48
LRCH3Q96II8 MIR5582-201ENST00000579697 68 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 MIR4431-201ENST00000579990 94 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 AL391358.1-201ENST00000605342 190 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 RMST_6.1-201ENST00000611980 203 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 AC068831.7-201ENST00000616954 363 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 AL360181.4-201ENST00000621752 134 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 AC092593.1-201ENST00000515413 1815 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.82□□□□□ -1.48
LRCH3Q96II8 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
LRCH3Q96II8 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
LRCH3Q96II8 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LRCH3Q96II8 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.82□□□□□ -1.48
LRCH3Q96II8 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.82□□□□□ -1.48
LRCH3Q96II8 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LRCH3Q96II8 THAP12P5-201ENST00000405864 2275 ntBASIC5.82□□□□□ -1.48
LRCH3Q96II8 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.82□□□□□ -1.48
LRCH3Q96II8 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LRCH3Q96II8 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LRCH3Q96II8 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.82□□□□□ -1.48
LRCH3Q96II8 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.82□□□□□ -1.48
LRCH3Q96II8 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
LRCH3Q96II8 AP001284.1-201ENST00000528393 2118 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRCH3Q96II8 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
LRCH3Q96II8 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRCH3Q96II8 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LRCH3Q96II8 AC140134.1-201ENST00000511830 3544 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.81□□□□□ -1.48
LRCH3Q96II8 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRCH3Q96II8 RNU6-1272P-201ENST00000362776 107 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 Y_RNA.525-201ENST00000384570 113 ntBASIC5.81□□□□□ -1.48
LRCH3Q96II8 RNA5SP171-201ENST00000391071 115 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms