Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL451062.2-201ENST00000427515 271 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 MED13P1-201ENST00000428342 171 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 RPS6P12-201ENST00000432491 726 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 UBE2V1P13-201ENST00000436983 439 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 RPL23AP33-201ENST00000442301 452 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 AL162395.1-201ENST00000457882 422 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 SNORD108-201ENST00000459332 71 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 CCDC34P1-201ENST00000507441 517 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 AC109635.4-202ENST00000531666 412 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 AC092470.1-201ENST00000546187 132 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 DNAJC8P1-201ENST00000554535 372 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 GNRHR2P1-201ENST00000555315 631 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 AC020914.4-201ENST00000597690 277 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 AL132822.1-201ENST00000617063 513 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
DDX11Q96FC9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DDX11Q96FC9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 AC027287.1-201ENST00000553115 1453 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
DDX11Q96FC9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 Y_RNA.197-201ENST00000364004 102 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 U3.11-201ENST00000364476 212 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 Y_RNA.414-201ENST00000384011 101 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 RNU6-1105P-201ENST00000384774 107 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 MIR200C-201ENST00000384980 68 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 AL590704.1-201ENST00000402856 794 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 AC005517.2-201ENST00000424673 553 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 EZH2P1-201ENST00000431167 291 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 AC011742.1-201ENST00000431448 434 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 CKS1BP5-201ENST00000434172 273 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 AC020550.1-201ENST00000447385 163 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 HMGB3P22-202ENST00000451823 572 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 RNU7-182P-201ENST00000459009 62 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 RNU7-180P-201ENST00000459240 63 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 RNU6-1088P-201ENST00000516850 104 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 HMGB1P41-201ENST00000520234 440 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 AC011979.2-201ENST00000527568 352 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 AL360157.1-201ENST00000565962 87 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 XIAPP1-201ENST00000603162 600 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 AL670379.11-201ENST00000604059 253 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 CYP2C61P-201ENST00000604072 290 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 AL670379.10-201ENST00000604330 253 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 AL670379.12-201ENST00000605291 253 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 AL670379.9-201ENST00000605428 253 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 AC019193.3-201ENST00000609144 554 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 AL136313.1-201ENST00000624804 202 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
DDX11Q96FC9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
DDX11Q96FC9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 AL356489.2-201ENST00000566968 3528 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 MTCO1P24-201ENST00000515438 1558 ntBASIC4.69□□□□□ -1.66
DDX11Q96FC9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
DDX11Q96FC9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
DDX11Q96FC9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.69□□□□□ -1.66
DDX11Q96FC9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.68□□□□□ -1.66
DDX11Q96FC9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
DDX11Q96FC9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
DDX11Q96FC9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
DDX11Q96FC9 Y_RNA.31-201ENST00000362574 102 ntBASIC4.68□□□□□ -1.66
DDX11Q96FC9 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.68□□□□□ -1.66
DDX11Q96FC9 RNU6-1029P-201ENST00000384109 107 ntBASIC4.68□□□□□ -1.66
DDX11Q96FC9 U3.29-201ENST00000391296 212 ntBASIC4.68□□□□□ -1.66
DDX11Q96FC9 AL606923.1-201ENST00000406616 190 ntBASIC4.68□□□□□ -1.66
DDX11Q96FC9 MIR548K-201ENST00000408406 116 ntBASIC4.68□□□□□ -1.66
DDX11Q96FC9 RNU2-29P-201ENST00000410423 189 ntBASIC4.68□□□□□ -1.66
DDX11Q96FC9 ARL5AP1-201ENST00000418991 388 ntBASIC4.68□□□□□ -1.66
DDX11Q96FC9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.68□□□□□ -1.66
DDX11Q96FC9 PMCHL1-202ENST00000423102 261 ntBASIC4.68□□□□□ -1.66
DDX11Q96FC9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.68□□□□□ -1.66
DDX11Q96FC9 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.68□□□□□ -1.66
DDX11Q96FC9 RPS11P1-201ENST00000451072 473 ntBASIC4.68□□□□□ -1.66
DDX11Q96FC9 AL645939.1-201ENST00000453429 797 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms