Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 MTCO2P32-201ENST00000514865 403 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 PRELID3BP4-201ENST00000515476 571 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 AC104115.2-201ENST00000523026 687 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.08□□□□□ -2.24
TTC28Q96AY4 MIR4711-201ENST00000578274 70 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 FAM60CP-201ENST00000591086 664 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 AC009229.3-201ENST00000608056 282 ntBASIC1.08□□□□□ -2.24
TTC28Q96AY4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TTC28Q96AY4 AC109780.2-201ENST00000413467 845 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 RPL30P4-201ENST00000429309 333 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TTC28Q96AY4 RPL30P12-201ENST00000474666 353 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.07□□□□□ -2.24
TTC28Q96AY4 RNA5SP468-201ENST00000516782 93 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.07□□□□□ -2.24
TTC28Q96AY4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.07□□□□□ -2.24
TTC28Q96AY4 SYF2P1-201ENST00000550658 413 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 AC107954.1-201ENST00000565906 727 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.07□□□□□ -2.24
TTC28Q96AY4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.07□□□□□ -2.24
TTC28Q96AY4 PABPC1P7-201ENST00000413177 1513 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 RNU6-203P-201ENST00000384038 104 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.07□□□□□ -2.24
TTC28Q96AY4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.07□□□□□ -2.24
TTC28Q96AY4 AC023347.2-201ENST00000433994 462 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.07□□□□□ -2.24
TTC28Q96AY4 RPL31P53-201ENST00000457065 348 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 AC087190.1-201ENST00000484462 480 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 RPS15AP34-201ENST00000487776 387 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 RNU1-61P-201ENST00000516107 151 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 SNORD59.2-201ENST00000516873 68 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 OR4V1P-201ENST00000525394 1140 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 AC023050.2-201ENST00000544968 387 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 AC006270.3-201ENST00000605967 1036 ntBASIC1.07□□□□□ -2.24
TTC28Q96AY4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TTC28Q96AY4 AC103710.2-202ENST00000641454 2853 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 Z95118.1-201ENST00000421372 247 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.06□□□□□ -2.24
TTC28Q96AY4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.06□□□□□ -2.24
TTC28Q96AY4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.06□□□□□ -2.24
TTC28Q96AY4 AL513343.1-201ENST00000451818 792 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 snoU13.7-201ENST00000459220 104 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 AC093801.2-201ENST00000503966 1050 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.06□□□□□ -2.24
TTC28Q96AY4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.06□□□□□ -2.24
TTC28Q96AY4 MIR4714-201ENST00000580728 77 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 SNORD84-203ENST00000584275 78 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 AC020923.1-201ENST00000624021 917 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TTC28Q96AY4 AL136520.1-201ENST00000600311 1322 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 AC009812.4-201ENST00000569134 1805 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 SNORA14A-201ENST00000364773 135 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 AC099548.1-201ENST00000421443 426 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 MTATP6P4-201ENST00000427725 675 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 HMGN2P16-201ENST00000456802 261 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.06□□□□□ -2.24
TTC28Q96AY4 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.06□□□□□ -2.24
TTC28Q96AY4 AF279873.1-201ENST00000523393 313 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TTC28Q96AY4 AC009220.3-201ENST00000604318 586 ntBASIC1.06□□□□□ -2.24
TTC28Q96AY4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.06□□□□□ -2.24
TTC28Q96AY4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TTC28Q96AY4 AC009902.3-201ENST00000606235 2172 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 MIR1265-201ENST00000408444 86 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 RPL23AP33-201ENST00000442301 452 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 OR6C72P-201ENST00000451403 892 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 snoU13.19-201ENST00000459148 104 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 SNORD116-30-201ENST00000516468 85 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
TTC28Q96AY4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.05□□□□□ -2.24
TTC28Q96AY4 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TTC28Q96AY4 HSPE1P14-201ENST00000605812 302 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 AC021755.4-201ENST00000616620 456 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TTC28Q96AY4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.05□□□□□ -2.24
TTC28Q96AY4 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.05□□□□□ -2.24
TTC28Q96AY4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TTC28Q96AY4 RNU6-1235P-201ENST00000384559 107 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 RNU6-244P-201ENST00000391028 104 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 SSXP9-201ENST00000417503 292 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.05□□□□□ -2.24
TTC28Q96AY4 AL109741.2-201ENST00000455561 343 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.05□□□□□ -2.24
TTC28Q96AY4 RNU6-498P-201ENST00000459468 107 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 RNA5SP285-201ENST00000516619 119 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.05□□□□□ -2.24
TTC28Q96AY4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.05□□□□□ -2.24
TTC28Q96AY4 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.05□□□□□ -2.24
TTC28Q96AY4 CENPUP2-201ENST00000555897 1186 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.05□□□□□ -2.24
TTC28Q96AY4 MIR6076-201ENST00000617521 113 ntBASIC1.05□□□□□ -2.24
TTC28Q96AY4 AL356057.2-201ENST00000403318 432 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 AC092447.6-201ENST00000414578 210 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 ELOCP11-201ENST00000436690 332 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.04□□□□□ -2.24
TTC28Q96AY4 ELOCP16-201ENST00000444494 332 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 AL360221.1-201ENST00000445989 335 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.04□□□□□ -2.24
TTC28Q96AY4 AC010285.1-201ENST00000470580 392 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms