Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC090616.3-201ENST00000582184 217 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AC008507.2-201ENST00000588402 1176 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AL035411.2-201ENST00000604022 421 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AC069304.2-201ENST00000605154 435 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 AC120349.2-201ENST00000625002 298 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 PABPC1P9-201ENST00000426076 1612 ntBASIC1.91□□□□□ -2.1
LMX1AQ8TE12 ZNF720P1-201ENST00000562403 1939 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 Y_RNA.25-201ENST00000362528 102 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 RNU6-270P-201ENST00000364131 105 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 RNU6-461P-201ENST00000364195 107 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 RNU6-1035P-201ENST00000384477 107 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 RPL7P27-201ENST00000403775 720 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 BTF3P8-201ENST00000414577 526 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 SPA17P1-201ENST00000416656 452 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 USP9YP27-201ENST00000418455 438 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 C1DP1-201ENST00000426049 402 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AL358075.3-201ENST00000426289 226 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AC092573.2-201ENST00000434546 243 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AC024082.2-201ENST00000434771 238 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 TAAR7P-201ENST00000436141 242 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AL603825.1-201ENST00000438481 80 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AL445687.1-201ENST00000439946 251 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 RPL39P6-201ENST00000448289 150 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AC011753.1-201ENST00000451001 220 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 RPS15AP17-201ENST00000470598 390 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 MRPL42P6-201ENST00000486397 371 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AC090453.1-201ENST00000495560 436 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 CKS1BP2-201ENST00000497342 240 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 MTCYBP16-201ENST00000509187 1129 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AC109464.2-201ENST00000510242 943 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AC112198.4-201ENST00000515450 351 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 RN7SKP31-201ENST00000516354 278 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AC092451.2-201ENST00000538746 658 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AC138915.2-201ENST00000569776 97 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 MIR4637-201ENST00000582405 84 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 OR1M4P-201ENST00000589199 287 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AC005332.6-201ENST00000613178 446 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AC023158.2-201ENST00000614876 543 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 UCA1.1-201ENST00000620952 75 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 AC011330.2-201ENST00000621680 635 ntBASIC1.9□□□□□ -2.11
LMX1AQ8TE12 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.9□□□□□ -2.11
LMX1AQ8TE12 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
LMX1AQ8TE12 RNU6-1257P-201ENST00000384625 110 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 MIR767-201ENST00000390228 109 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AL603865.2-201ENST00000401679 213 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 RNU2-20P-201ENST00000410425 191 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 EIF1AXP1-201ENST00000419267 435 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 NDUFB4P7-201ENST00000423198 363 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AC098614.2-201ENST00000426040 255 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 DPRXP1-201ENST00000426312 460 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 MTCO1P3-201ENST00000429327 192 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 RPL26P6-201ENST00000440913 438 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.89□□□□□ -2.11
LMX1AQ8TE12 TRGVB-201ENST00000453257 471 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 snoU13.28-201ENST00000459235 104 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 RPL31P60-201ENST00000478450 367 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AC092902.1-201ENST00000486999 259 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 MTAPP1-201ENST00000489154 819 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.89□□□□□ -2.11
LMX1AQ8TE12 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AC022483.1-201ENST00000514020 567 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 RNU6-1282P-201ENST00000516735 96 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 SNORA31.18-201ENST00000517043 134 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.89□□□□□ -2.11
LMX1AQ8TE12 SUB1P1-201ENST00000524415 382 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AP001189.2-201ENST00000527320 189 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.89□□□□□ -2.11
LMX1AQ8TE12 GLYCAM1-201ENST00000546596 285 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.89□□□□□ -2.11
LMX1AQ8TE12 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.89□□□□□ -2.11
LMX1AQ8TE12 MIR3616-201ENST00000584070 92 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AC009314.1-201ENST00000603871 304 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AL445435.1-201ENST00000604232 665 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AL158211.2-201ENST00000607282 395 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AC080013.4-201ENST00000607624 649 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AC124016.2-201ENST00000610058 665 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AC018926.1-201ENST00000616335 435 ntBASIC1.89□□□□□ -2.11
LMX1AQ8TE12 AL596245.1-201ENST00000618994 362 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms