Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 MIR6810-201ENST00000622701 70 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 AC022031.1-201ENST00000585985 2593 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 AL731532.2-201ENST00000623542 1953 ntBASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 Y_RNA.43-201ENST00000362670 111 ntBASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 RNA5SP447-201ENST00000363749 119 ntBASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 RNU6-131P-201ENST00000391144 107 ntBASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 RPS4XP7-201ENST00000406274 780 ntBASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 RPL23AP93-201ENST00000440847 484 ntBASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 AL591623.2-201ENST00000449978 222 ntBASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 AL139099.1-201ENST00000497398 403 ntBASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 SEPT14P8-201ENST00000508026 178 ntBASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 AC015912.2-201ENST00000571053 181 ntBASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 MIR4284-201ENST00000578924 81 ntBASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 AL356218.2-201ENST00000605264 187 ntBASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 MIR376A1-201ENST00000616574 68 ntBASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 AC008079.2-201ENST00000623543 20396 ntBASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.37□□□□□ -1.55
NEDD1Q8NHV4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 AC008725.1-201ENST00000605123 2263 ntBASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 RNU1-83P-201ENST00000363426 164 ntBASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 AL592291.1-201ENST00000403830 352 ntBASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 OR2AH1P-201ENST00000425717 928 ntBASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 RPL36P19-201ENST00000430744 301 ntBASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 AC005094.1-201ENST00000440420 368 ntBASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 AL136126.1-201ENST00000473603 402 ntBASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 RN7SL860P-201ENST00000473738 223 ntBASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 AC018437.1-201ENST00000492214 406 ntBASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 AC010469.2-201ENST00000496412 480 ntBASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 AP005019.3-201ENST00000620418 560 ntBASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 AC107068.1-201ENST00000563286 4218 ntBASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 AC107081.3-201ENST00000612715 2034 ntBASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.36□□□□□ -1.55
NEDD1Q8NHV4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 HSPA8P4-201ENST00000511877 1920 ntBASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 Y_RNA.233-201ENST00000364407 101 ntBASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 RNU6-1329P-201ENST00000365664 107 ntBASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 Y_RNA.581-201ENST00000391017 97 ntBASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 RNA5SP107-201ENST00000411358 122 ntBASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 BX842559.1-201ENST00000419615 532 ntBASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 SNORD121B-201ENST00000458838 81 ntBASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 HMGB1P25-201ENST00000468402 607 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms