Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AL158050.1-201ENST00000416077 457 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 HMGB1P49-201ENST00000418882 569 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 AC246680.2-201ENST00000422106 389 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 RPL31P63-201ENST00000422565 375 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 MICF-203ENST00000432679 129 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 MTCO2P9-201ENST00000503214 694 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 COX7A2P2-201ENST00000505291 250 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 AC098591.2-201ENST00000510152 315 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 AC022483.1-201ENST00000514020 567 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 MIR892C-201ENST00000516410 77 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 RNU6-1256P-201ENST00000516539 103 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 SCARNA3-201ENST00000517097 143 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 AC091544.4-201ENST00000555268 342 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 AL133241.1-201ENST00000556832 487 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 MTATP6P25-201ENST00000574491 261 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 AC078899.2-201ENST00000595282 212 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 OR4H6P-202ENST00000603819 340 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 SNRPGP19-201ENST00000603826 189 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 AC012493.3-201ENST00000604494 112 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 AC080013.4-201ENST00000607624 649 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 MIR6130-201ENST00000619419 109 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 AL445493.3-201ENST00000619568 477 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 AL590396.4-201ENST00000636779 956 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
ZNF439Q8NDP4 ZNF702P-202ENST00000434269 1966 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 RNA5SP276-201ENST00000362580 94 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 RNU6-839P-201ENST00000363347 108 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 RNU6-750P-201ENST00000390946 107 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 HMGB1P17-201ENST00000403495 628 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AL450338.1-201ENST00000407987 512 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AC003685.2-201ENST00000422795 395 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AC092047.1-201ENST00000424997 240 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AC234064.1-201ENST00000436312 247 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 BNIP3P2-201ENST00000441221 577 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 RPL21P134-201ENST00000453468 483 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 RPL23AP3-201ENST00000453844 468 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AP1S2P1-201ENST00000457344 379 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 RNU7-140P-201ENST00000459546 60 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AC107032.1-201ENST00000485945 480 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 MTAPP1-201ENST00000489154 819 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AL049874.1-201ENST00000489560 388 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 HSPE1P18-201ENST00000517602 280 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 MIR4299-201ENST00000577899 72 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 MIR4529-201ENST00000578110 78 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AL355297.2-201ENST00000604792 129 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 MTND4LP5-201ENST00000605152 292 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 TUG1_1.1-201ENST00000610654 145 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 AC080188.3-201ENST00000624842 748 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 MIR7157-201ENST00000635801 60 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.59□□□□□ -2.15
ZNF439Q8NDP4 OR4G2P-202ENST00000641004 1759 ntBASIC1.59□□□□□ -2.16
ZNF439Q8NDP4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.16
ZNF439Q8NDP4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 HSPA8P4-201ENST00000511877 1920 ntBASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 OR5T3-201ENST00000303059 1023 ntBASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 RNU6-650P-201ENST00000365658 111 ntBASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 RNU6-76P-201ENST00000384060 104 ntBASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 RNU6-217P-201ENST00000384164 104 ntBASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 RNU6-549P-201ENST00000384433 107 ntBASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 MIR514A1-201ENST00000385133 98 ntBASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 U8.14-201ENST00000390843 143 ntBASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 SFR1P2-201ENST00000421841 730 ntBASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 AC096920.1-201ENST00000423991 241 ntBASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 AIMP1P2-201ENST00000425294 312 ntBASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 UBE2D3P1-201ENST00000436669 444 ntBASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 AL353689.1-201ENST00000438895 199 ntBASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.58□□□□□ -2.16
ZNF439Q8NDP4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms