Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL133153.1-201ENST00000557756 303 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 MIR4703-201ENST00000577728 79 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 BNIP3P25-201ENST00000596023 559 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AC113194.1-201ENST00000606037 500 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AL031666.3-201ENST00000609320 1006 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AL590099.1-201ENST00000615276 138 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AC090971.5-201ENST00000621102 293 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 SNORA4.3-201ENST00000365564 137 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 RNU6-1029P-201ENST00000384109 107 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 SNORD37.1-201ENST00000390968 65 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 CYCSP32-201ENST00000440548 321 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 MTND1P9-201ENST00000453775 944 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 SNORA59A-201ENST00000459326 152 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 MTCO1P29-201ENST00000496868 288 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AC068305.1-201ENST00000497406 726 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 CCDC34P1-201ENST00000507441 517 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 MTCO3P44-201ENST00000510977 541 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 RNU6-864P-201ENST00000516256 108 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 SNORA25.17-201ENST00000517184 124 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 HMGB1P41-201ENST00000520234 440 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AC022695.1-201ENST00000522089 237 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AP000857.1-201ENST00000532151 543 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 FRG2DP-202ENST00000566967 323 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AC022968.1-201ENST00000567372 442 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AC012182.1-201ENST00000570133 895 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 LLPHP1-201ENST00000603571 367 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AL022099.1-201ENST00000604551 712 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 CTHRC1P1-201ENST00000605383 469 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AC005000.2-201ENST00000605468 310 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 AC004908.2-201ENST00000609090 574 ntBASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC44A3Q8N4M1 PNPT1P2-201ENST00000456768 2050 ntBASIC3.96□□□□□ -1.77
SLC44A3Q8N4M1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 Y_RNA.128-201ENST00000363391 112 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 Y_RNA.216-201ENST00000364205 93 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 RNU4-66P-201ENST00000365199 138 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 MIR513A2-201ENST00000385249 127 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 MIR1251-201ENST00000408552 70 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 RNU2-29P-201ENST00000410423 189 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 RNU4-14P-201ENST00000410858 122 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 RAC1P3-201ENST00000416129 580 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 PRPS1P1-201ENST00000445305 876 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 RNU7-152P-201ENST00000458982 64 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 RNU7-59P-201ENST00000459101 61 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AC012181.1-201ENST00000479895 423 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AC005741.1-201ENST00000511094 432 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 RNU7-51P-201ENST00000516560 62 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AC109635.4-202ENST00000531666 412 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AC024619.4-201ENST00000580924 316 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms