Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 Y_RNA.23-201ENST00000362496 106 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 Y_RNA.71-201ENST00000362892 104 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 RNU6-818P-201ENST00000364837 108 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 SNORA70.6-201ENST00000383934 134 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 Y_RNA.570-201ENST00000384750 101 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 SNORA40.19-201ENST00000390846 128 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 RNU2-52P-201ENST00000410680 190 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 AL139148.1-201ENST00000427122 680 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 POLR2KP2-201ENST00000438155 177 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 AC009296.1-201ENST00000443146 155 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 MRPS10P1-201ENST00000448483 130 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 AC097462.2-201ENST00000504623 481 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 AC126177.5-201ENST00000549599 178 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 AC112693.2-201ENST00000556538 232 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 HMGB1P14-201ENST00000557424 591 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 AC234771.5-201ENST00000600161 514 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 AC108738.1-201ENST00000603703 237 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 AC244107.2-201ENST00000611773 76 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 AC006001.4-201ENST00000622243 395 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 MIR4496-201ENST00000635896 61 ntBASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SCUBE3Q8IX30 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 Y_RNA.7-201ENST00000362352 102 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 RN7SKP145-201ENST00000363291 303 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 RNU6-263P-201ENST00000363811 107 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 Y_RNA.217-201ENST00000364214 105 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 BTF3L4P2-201ENST00000392798 346 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 AL022722.2-201ENST00000402519 180 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 AL513331.1-201ENST00000411908 397 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 AL137159.1-201ENST00000452808 512 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 Y_RNA.641-201ENST00000459414 105 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 AC022795.1-201ENST00000473808 480 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 RPL26P26-201ENST00000480251 434 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 AC007686.1-201ENST00000488511 463 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 HMGB3P3-201ENST00000510526 400 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 HMGB1P40-201ENST00000525121 540 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 RN7SL356P-201ENST00000582228 248 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 AC023043.4-201ENST00000612081 449 ntBASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCUBE3Q8IX30 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SCUBE3Q8IX30 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.65□□□□□ -1.51
SCUBE3Q8IX30 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.65□□□□□ -1.51
SCUBE3Q8IX30 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.65□□□□□ -1.51
SCUBE3Q8IX30 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
SCUBE3Q8IX30 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 Y_RNA.218-201ENST00000364218 104 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 SNORD14B-201ENST00000364533 90 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 SNORD116-14-201ENST00000383894 92 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 SNORD116-17-201ENST00000383929 92 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 RNU6-20P-201ENST00000384106 107 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 SNORA36C-201ENST00000384289 132 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 SNORD116-15-201ENST00000384445 92 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 SNORD116-20-201ENST00000384529 92 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 SNORD116-19-201ENST00000384729 92 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 RNA5SP339-201ENST00000390987 122 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 RNU2-50P-201ENST00000410494 143 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 AC099336.2-201ENST00000422457 254 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 SEPT7P4-201ENST00000437076 306 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 AC099560.2-201ENST00000457554 255 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 RN7SL172P-201ENST00000460535 303 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 RPL23AP75-201ENST00000491601 451 ntBASIC5.64□□□□□ -1.51
SCUBE3Q8IX30 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms