Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 USP9YP36-201ENST00000424581 829 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 RPL7P46-201ENST00000425129 740 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AL513043.1-201ENST00000439124 535 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 MTND2P22-201ENST00000444325 1033 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 MTATP6P26-201ENST00000445926 662 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 GAPDHP27-201ENST00000447427 1020 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AL590365.1-201ENST00000450788 243 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AC104472.2-201ENST00000469035 601 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AL049874.1-201ENST00000489560 388 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 ZNF519P3-201ENST00000557158 1032 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AC055876.1-202ENST00000567053 138 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 MIR5697-201ENST00000578045 78 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AC105224.1-201ENST00000587055 421 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AC007038.2-201ENST00000608095 740 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AL355472.4-201ENST00000610233 626 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AC073114.1-201ENST00000612027 490 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AL020991.1-201ENST00000612314 373 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AC010338.1-201ENST00000621823 717 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 FAM35BP-202ENST00000497389 3337 ntBASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC60Q8IWA6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 DEFB108F-201ENST00000344638 222 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 SNORA23-201ENST00000365128 182 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 RNU5E-5P-201ENST00000365379 116 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 RNU1-39P-201ENST00000383897 165 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 BMS1P22-201ENST00000414726 313 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AL451074.5-201ENST00000415894 435 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC063976.3-201ENST00000426849 329 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC093151.1-201ENST00000427711 313 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AL390023.1-201ENST00000428836 262 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 RPL35AP22-201ENST00000436855 335 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 RPS29P6-201ENST00000438196 145 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC093392.2-201ENST00000450682 337 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 RPS15AP36-201ENST00000492022 382 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC112204.1-201ENST00000502591 103 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 SNORA31.1-201ENST00000515993 133 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 SNORA31.5-201ENST00000516190 133 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 SNORA70.16-201ENST00000516390 95 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 RNU6-1003P-201ENST00000517099 105 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC123904.2-201ENST00000548059 300 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 ZNF861P-201ENST00000588126 639 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC012065.4-201ENST00000602445 679 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC004908.2-201ENST00000609090 574 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC009570.1-201ENST00000609599 745 ntBASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC60Q8IWA6 AC009487.2-201ENST00000420969 6821 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 RNU4-21P-201ENST00000362802 126 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 MIR9-1-201ENST00000385198 89 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 RNU6-754P-201ENST00000391166 107 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 RNA5SP38-201ENST00000410750 119 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 CYCSP46-201ENST00000423569 204 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AC019097.1-201ENST00000424783 735 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 RPL7L1P10-201ENST00000427790 463 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 DPPA2P1-201ENST00000428060 556 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AL049734.2-201ENST00000441066 616 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 USP9YP12-201ENST00000450481 570 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 ELL2P3-201ENST00000457883 1602 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AC116337.2-201ENST00000477662 156 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 RPL31P60-201ENST00000478450 367 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AC090525.1-201ENST00000479116 478 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 HSPE1P6-201ENST00000479457 291 ntBASIC3.06□□□□□ -1.92
CCDC60Q8IWA6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms