Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 RPL23AP75-201ENST00000491601 451 ntBASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 RPS27P26-201ENST00000494583 239 ntBASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 MIR3684-201ENST00000579779 74 ntBASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 AP000769.2-201ENST00000602344 396 ntBASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 AL133393.1-201ENST00000603277 287 ntBASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 AC090617.7-201ENST00000623952 126 ntBASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 AC116096.1-201ENST00000566804 2314 ntBASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 AC239868.2-201ENST00000564237 4527 ntBASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
PTCRAQ6ISU1 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 SNORD1C-201ENST00000363315 78 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 RNU6-626P-201ENST00000363354 107 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 RNU6-146P-201ENST00000384602 108 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 Y_RNA.570-201ENST00000384750 101 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 MIR10A-201ENST00000385043 110 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 RPL11P3-201ENST00000395256 523 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 RPS29P10-201ENST00000439197 166 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 AC124916.1-201ENST00000444020 547 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 RNU6-1114P-201ENST00000516022 107 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 RN7SKP49-201ENST00000516675 260 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 RPL21P9-201ENST00000556149 474 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 AC022968.1-201ENST00000567372 442 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 AC002545.1-201ENST00000592511 181 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 AL359881.1-201ENST00000602916 267 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 AC084757.4-201ENST00000616350 526 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 U73479.1-201ENST00000618062 168 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 IGHVIII-44-202ENST00000636235 289 ntBASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCRAQ6ISU1 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 AL022323.4-201ENST00000623980 13120 ntBASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 RNA5SP191-201ENST00000362585 102 ntBASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 Y_RNA.357-201ENST00000365487 109 ntBASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 MIR23B-201ENST00000384832 97 ntBASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 RNA5SP213-201ENST00000391031 106 ntBASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 MIR298-201ENST00000401212 88 ntBASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 AL357139.1-201ENST00000407792 426 ntBASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 POLR2KP2-201ENST00000438155 177 ntBASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 RN7SL604P-201ENST00000492589 296 ntBASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 AC008694.2-201ENST00000517591 306 ntBASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 U4.7-201ENST00000638126 106 ntBASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCRAQ6ISU1 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTCRAQ6ISU1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTCRAQ6ISU1 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTCRAQ6ISU1 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTCRAQ6ISU1 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.4□□□□□ -1.54
PTCRAQ6ISU1 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.4□□□□□ -1.54
PTCRAQ6ISU1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTCRAQ6ISU1 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms