Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
UBR4Q5T4S7 AL121594.5-201ENST00000631724 573 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
UBR4Q5T4S7 RNU6-989P-201ENST00000362756 107 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.65□□□□□ -2.31
UBR4Q5T4S7 MTCYBP45-201ENST00000435243 565 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 RPS27P5-201ENST00000444247 244 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 PTENP1-201ENST00000447117 1215 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.65□□□□□ -2.31
UBR4Q5T4S7 RFPL1S-203ENST00000539579 330 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 UBE2L4-201ENST00000587688 464 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 AC073111.2-201ENST00000605657 1075 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 AC240442.1-201ENST00000616055 283 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 ZNF702P-202ENST00000434269 1966 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 TXNP7-201ENST00000406296 293 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 RNU4-78P-201ENST00000410940 126 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 AC005517.2-201ENST00000424673 553 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC0.65□□□□□ -2.31
UBR4Q5T4S7 AC008571.1-201ENST00000467232 300 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 RPL30P12-201ENST00000474666 353 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.65□□□□□ -2.31
UBR4Q5T4S7 Y_RNA.181-201ENST00000363872 101 ntBASIC0.64□□□□□ -2.31
UBR4Q5T4S7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
UBR4Q5T4S7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.64□□□□□ -2.31
UBR4Q5T4S7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.64□□□□□ -2.31
UBR4Q5T4S7 RPL7P53-201ENST00000421245 739 ntBASIC0.64□□□□□ -2.31
UBR4Q5T4S7 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.64□□□□□ -2.31
UBR4Q5T4S7 MRPS17P9-201ENST00000511924 393 ntBASIC0.64□□□□□ -2.31
UBR4Q5T4S7 AL122125.1-201ENST00000616999 600 ntBASIC0.64□□□□□ -2.31
UBR4Q5T4S7 MIR4320-201ENST00000636981 65 ntBASIC0.64□□□□□ -2.31
UBR4Q5T4S7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
UBR4Q5T4S7 RNU6-152P-201ENST00000384037 107 ntBASIC0.64□□□□□ -2.31
UBR4Q5T4S7 UBE2FP3-201ENST00000436366 524 ntBASIC0.64□□□□□ -2.31
UBR4Q5T4S7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
UBR4Q5T4S7 AL031659.1-201ENST00000447075 539 ntBASIC0.64□□□□□ -2.31
UBR4Q5T4S7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC0.64□□□□□ -2.31
UBR4Q5T4S7 AC233266.2-201ENST00000567067 528 ntBASIC0.64□□□□□ -2.31
UBR4Q5T4S7 AC083899.3-201ENST00000603413 594 ntBASIC0.64□□□□□ -2.31
UBR4Q5T4S7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
UBR4Q5T4S7 U8.14-201ENST00000390843 143 ntBASIC0.64□□□□□ -2.31
UBR4Q5T4S7 AC004941.2-201ENST00000427009 228 ntBASIC0.64□□□□□ -2.31
UBR4Q5T4S7 AC087190.1-201ENST00000484462 480 ntBASIC0.64□□□□□ -2.31
UBR4Q5T4S7 AC008427.1-201ENST00000503102 655 ntBASIC0.64□□□□□ -2.31
UBR4Q5T4S7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.64□□□□□ -2.31
UBR4Q5T4S7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.64□□□□□ -2.31
UBR4Q5T4S7 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.64□□□□□ -2.31
UBR4Q5T4S7 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.64□□□□□ -2.31
UBR4Q5T4S7 AC066616.2-201ENST00000559334 1481 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 SNORD49B-201ENST00000365172 72 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 RNU6-185P-201ENST00000384421 107 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 RNA5SP465-201ENST00000391195 109 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 RNA5SP299-201ENST00000391203 116 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 ABI1P1-201ENST00000603375 1120 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AP000654.2-201ENST00000605633 586 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 SEPT7P3-201ENST00000455017 621 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 RNA5SP233-201ENST00000459153 113 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AC092140.2-201ENST00000618027 521 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AC073308.1-201ENST00000623696 305 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 UBE2V1P13-201ENST00000436983 439 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AL109741.2-201ENST00000455561 343 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 RNA5SP310-201ENST00000459084 116 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 SNORA31.25-201ENST00000517242 134 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AP003499.2-201ENST00000624100 483 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 RPL5P19-201ENST00000404228 893 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AC099336.2-201ENST00000422457 254 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 COL6A4P2-205ENST00000509855 506 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AC005741.1-201ENST00000511094 432 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AC006254.3-201ENST00000603353 884 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 AL159169.2-201ENST00000610061 1269 ntBASIC0.63□□□□□ -2.31
UBR4Q5T4S7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
UBR4Q5T4S7 OR4G2P-201ENST00000328113 903 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC0.62□□□□□ -2.31
UBR4Q5T4S7 AC073310.1-201ENST00000423226 1033 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 RPS25P9-201ENST00000435591 252 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 PRELID2P1-201ENST00000552837 301 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC0.62□□□□□ -2.31
UBR4Q5T4S7 RNU6-119P-201ENST00000364882 107 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 Y_RNA.475-201ENST00000384345 101 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 HMGN2P38-201ENST00000423806 265 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 USP9YP24-201ENST00000434374 697 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
UBR4Q5T4S7 HMGN1P30-201ENST00000589286 268 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 AL355812.1-201ENST00000603215 216 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms