Protein–RNA interactions for Protein: Q3MHD2

LSM12, Protein LSM12 homolog, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12Q3MHD2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.05□□□□□ -1.76
LSM12Q3MHD2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.05□□□□□ -1.76
LSM12Q3MHD2 AL773545.4-201ENST00000637262 310 ntBASIC4.05□□□□□ -1.76
LSM12Q3MHD2 AL513478.4-201ENST00000641636 310 ntBASIC4.05□□□□□ -1.76
LSM12Q3MHD2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LSM12Q3MHD2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LSM12Q3MHD2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LSM12Q3MHD2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.05□□□□□ -1.76
LSM12Q3MHD2 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LSM12Q3MHD2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LSM12Q3MHD2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.04□□□□□ -1.76
LSM12Q3MHD2 RNU6-1226P-201ENST00000384317 107 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 Y_RNA.473-201ENST00000384333 102 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LSM12Q3MHD2 EIF4E2P1-201ENST00000393781 255 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AC015911.1-201ENST00000495111 156 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 HMGB1P21-201ENST00000502313 581 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AC093767.1-201ENST00000504523 156 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AC008526.1-201ENST00000509149 338 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 Y_RNA.661-201ENST00000516003 99 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 RNU7-51P-201ENST00000516560 62 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 RN7SKP92-201ENST00000517266 244 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.04□□□□□ -1.76
LSM12Q3MHD2 IGKV2D-23-201ENST00000518179 286 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM12Q3MHD2 OR8R1P-201ENST00000543943 764 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AL355816.1-201ENST00000607951 118 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AC100827.5-201ENST00000615883 426 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AL357559.1-201ENST00000622228 274 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AL445363.3-201ENST00000623080 671 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AL136313.1-201ENST00000624804 202 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AC140479.6-201ENST00000633535 357 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 MTND5P27-201ENST00000428871 1720 ntBASIC4.04□□□□□ -1.76
LSM12Q3MHD2 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.04□□□□□ -1.76
LSM12Q3MHD2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM12Q3MHD2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.03□□□□□ -1.76
LSM12Q3MHD2 AC007529.1-201ENST00000418574 2178 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.03□□□□□ -1.76
LSM12Q3MHD2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LSM12Q3MHD2 HSPA8P1-201ENST00000425843 1833 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 RNU6-188P-201ENST00000364207 107 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 RNU6-61P-201ENST00000365528 109 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 SNORA24.1-201ENST00000384401 135 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 Y_RNA.576-201ENST00000384781 102 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 MIR129-1-201ENST00000384972 72 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LSM12Q3MHD2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LSM12Q3MHD2 RNU6-1109P-201ENST00000391187 107 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 RNA5SP239-201ENST00000410218 129 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.03□□□□□ -1.76
LSM12Q3MHD2 DPH3P2-201ENST00000422618 250 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.03□□□□□ -1.76
LSM12Q3MHD2 AL356535.1-201ENST00000440335 398 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 PHBP16-201ENST00000446318 950 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LSM12Q3MHD2 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LSM12Q3MHD2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.03□□□□□ -1.76
LSM12Q3MHD2 AC068781.1-201ENST00000488231 618 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 AC069499.1-201ENST00000489433 509 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 RN7SL810P-201ENST00000493031 276 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 HIGD1AP13-201ENST00000509878 289 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 RNU6-699P-201ENST00000517081 110 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LSM12Q3MHD2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.03□□□□□ -1.76
LSM12Q3MHD2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.03□□□□□ -1.76
LSM12Q3MHD2 AC062037.2-201ENST00000610137 73 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 AC011890.2-201ENST00000613393 294 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 RN7SL722P-201ENST00000617780 284 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 RN7SL565P-201ENST00000618246 284 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 AC103705.1-201ENST00000619013 241 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 AC078938.1-201ENST00000620993 318 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 AC025034.2-201ENST00000623264 286 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 AP000843.1-201ENST00000624880 701 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 AC032011.1-201ENST00000611703 1549 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 AC025031.4-201ENST00000621248 3271 ntBASIC4.03□□□□□ -1.76
LSM12Q3MHD2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
LSM12Q3MHD2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.03□□□□□ -1.76
LSM12Q3MHD2 LINC02471-203ENST00000641941 4752 ntBASIC4.02□□□□□ -1.77
LSM12Q3MHD2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LSM12Q3MHD2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.02□□□□□ -1.77
LSM12Q3MHD2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.02□□□□□ -1.77
LSM12Q3MHD2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LSM12Q3MHD2 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
LSM12Q3MHD2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
LSM12Q3MHD2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.02□□□□□ -1.77
LSM12Q3MHD2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LSM12Q3MHD2 Y_RNA.80-201ENST00000362996 102 ntBASIC4.02□□□□□ -1.77
LSM12Q3MHD2 RNU6-179P-201ENST00000363350 107 ntBASIC4.02□□□□□ -1.77
LSM12Q3MHD2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LSM12Q3MHD2 RNU6-328P-201ENST00000390887 106 ntBASIC4.02□□□□□ -1.77
LSM12Q3MHD2 AL590139.1-201ENST00000416267 400 ntBASIC4.02□□□□□ -1.77
LSM12Q3MHD2 AC119751.6-201ENST00000416712 186 ntBASIC4.02□□□□□ -1.77
LSM12Q3MHD2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms