Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 HMGN1P28-201ENST00000521340 364 ntBASIC2.62□□□□□ -1.99
CCNA1P78396 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.62□□□□□ -1.99
CCNA1P78396 AC092451.2-201ENST00000538746 658 ntBASIC2.62□□□□□ -1.99
CCNA1P78396 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.62□□□□□ -1.99
CCNA1P78396 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.62□□□□□ -1.99
CCNA1P78396 MIR5708-201ENST00000579723 85 ntBASIC2.62□□□□□ -1.99
CCNA1P78396 HMGN2P15-201ENST00000585707 270 ntBASIC2.62□□□□□ -1.99
CCNA1P78396 AC004987.4-201ENST00000603383 338 ntBASIC2.62□□□□□ -1.99
CCNA1P78396 AC025754.2-201ENST00000606491 432 ntBASIC2.62□□□□□ -1.99
CCNA1P78396 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.62□□□□□ -1.99
CCNA1P78396 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.62□□□□□ -1.99
CCNA1P78396 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.62□□□□□ -1.99
CCNA1P78396 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.62□□□□□ -1.99
CCNA1P78396 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCNA1P78396 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCNA1P78396 AC002543.1-201ENST00000299783 1954 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 AC009902.3-201ENST00000606235 2172 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 MIR764-201ENST00000390811 85 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 MIR888-201ENST00000401186 77 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCNA1P78396 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.61□□□□□ -1.99
CCNA1P78396 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CCNA1P78396 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 AL139109.1-201ENST00000455491 297 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 RPL26P9-201ENST00000457466 433 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 SNORD121B-201ENST00000458838 81 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 AC107626.1-201ENST00000471084 183 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 AC090096.1-201ENST00000489168 390 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 AC087808.1-201ENST00000520501 361 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.61□□□□□ -1.99
CCNA1P78396 AC004486.1-201ENST00000546846 233 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.61□□□□□ -1.99
CCNA1P78396 HIGD1AP17-201ENST00000554576 276 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 AC104237.2-201ENST00000612456 443 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.61□□□□□ -1.99
CCNA1P78396 AL357080.1-201ENST00000617394 239 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 AP000943.4-201ENST00000622912 357 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 MIR219B-201ENST00000637023 88 ntBASIC2.61□□□□□ -1.99
CCNA1P78396 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCNA1P78396 DDX10P1-201ENST00000448545 1933 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
CCNA1P78396 RNU5E-8P-201ENST00000363502 116 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 SNORA25.6-201ENST00000364121 118 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 RNU6-1078P-201ENST00000364522 103 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 RNU6-359P-201ENST00000365466 108 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 RNU6-140P-201ENST00000384566 108 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.6□□□□□ -1.99
CCNA1P78396 RNU2-33P-201ENST00000410344 192 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.6□□□□□ -1.99
CCNA1P78396 AL139421.1-201ENST00000423010 169 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 RPS15AP28-201ENST00000435088 386 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 RPS15AP5-201ENST00000436276 388 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 OSTCP8-201ENST00000445117 448 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.6□□□□□ -1.99
CCNA1P78396 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.6□□□□□ -1.99
CCNA1P78396 TRGVB-201ENST00000453257 471 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.6□□□□□ -1.99
CCNA1P78396 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.6□□□□□ -1.99
CCNA1P78396 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.6□□□□□ -1.99
CCNA1P78396 AC105252.1-201ENST00000503089 286 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.6□□□□□ -1.99
CCNA1P78396 TBCAP3-201ENST00000512475 312 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 AC112198.4-201ENST00000515450 351 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 RNU5F-8P-201ENST00000515941 111 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 MTND1P36-201ENST00000522384 936 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.6□□□□□ -1.99
CCNA1P78396 SLC2A13P1-201ENST00000531560 322 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.6□□□□□ -1.99
CCNA1P78396 MIR4658-201ENST00000584344 65 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 AC069545.1-201ENST00000605671 358 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 AC025594.3-201ENST00000613068 790 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 HMGB1P24-202ENST00000615653 685 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.6□□□□□ -1.99
CCNA1P78396 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.6□□□□□ -1.99
CCNA1P78396 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCNA1P78396 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCNA1P78396 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCNA1P78396 RNU6-637P-201ENST00000384050 107 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 MIR221-201ENST00000385135 110 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 DHFRP6-201ENST00000401776 268 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 SNORA11.4-201ENST00000408823 129 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 RN7SKP32-201ENST00000410167 303 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 AC069282.1-201ENST00000411911 526 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 AC023141.4-201ENST00000412031 328 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 AC096649.2-201ENST00000416186 393 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 AC013262.1-201ENST00000426710 252 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 AC007919.1-201ENST00000429380 217 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.59□□□□□ -1.99
CCNA1P78396 MTCYBP42-201ENST00000444653 1130 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 AC104058.1-201ENST00000448028 297 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 RPL23AP42-201ENST00000471152 471 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 AC068587.2-201ENST00000478386 781 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.59□□□□□ -1.99
CCNA1P78396 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.59□□□□□ -1.99
CCNA1P78396 MTCYBP16-201ENST00000509187 1129 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.59□□□□□ -1.99
CCNA1P78396 HMGB1P41-201ENST00000520234 440 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.59□□□□□ -1.99
CCNA1P78396 OR4R1P-201ENST00000529879 463 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms