Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.28□□□□□ -1.88
SEC61A1P61619 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.28□□□□□ -1.88
SEC61A1P61619 AC090617.10-201ENST00000624308 134 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.28□□□□□ -1.88
SEC61A1P61619 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.28□□□□□ -1.88
SEC61A1P61619 OR4G1P-203ENST00000641984 1631 ntBASIC3.28□□□□□ -1.88
SEC61A1P61619 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.89
SEC61A1P61619 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
SEC61A1P61619 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.28□□□□□ -1.89
SEC61A1P61619 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.89
SEC61A1P61619 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.27□□□□□ -1.89
SEC61A1P61619 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SEC61A1P61619 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SEC61A1P61619 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SEC61A1P61619 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.27□□□□□ -1.89
SEC61A1P61619 PWAR6-201ENST00000552334 4618 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
SEC61A1P61619 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SEC61A1P61619 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SEC61A1P61619 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SEC61A1P61619 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SEC61A1P61619 HSPE1P11-201ENST00000339579 310 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 Y_RNA.11-201ENST00000362375 109 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 RNU6-600P-201ENST00000362524 99 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 RNU6-845P-201ENST00000362578 103 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 SNORD81.2-201ENST00000365153 76 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 MIR30B-201ENST00000384850 88 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.27□□□□□ -1.89
SEC61A1P61619 RNU2-43P-201ENST00000410306 190 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 RNA5SP118-201ENST00000410385 109 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 RNU2-39P-201ENST00000410604 198 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 RNU6-1148P-201ENST00000410992 104 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 PDCL2P1-201ENST00000419302 352 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 AC099677.1-201ENST00000420575 175 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 RPS15AP6-201ENST00000420703 385 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.27□□□□□ -1.89
SEC61A1P61619 MED13P1-201ENST00000428342 171 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.27□□□□□ -1.89
SEC61A1P61619 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.27□□□□□ -1.89
SEC61A1P61619 AC005094.1-201ENST00000440420 368 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.27□□□□□ -1.89
SEC61A1P61619 CBWD4P-201ENST00000445695 655 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.27□□□□□ -1.89
SEC61A1P61619 AC006539.3-201ENST00000454258 129 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 AL162395.1-201ENST00000457882 422 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 MRPS17P3-201ENST00000465453 385 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 AC126389.1-201ENST00000477436 290 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 TRBV12-2-201ENST00000489763 344 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 RN7SL323P-201ENST00000494712 295 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 AC092436.1-201ENST00000506450 503 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.27□□□□□ -1.89
SEC61A1P61619 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.27□□□□□ -1.89
SEC61A1P61619 AC026801.2-201ENST00000515352 425 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 Y_RNA.675-201ENST00000516389 149 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.27□□□□□ -1.89
SEC61A1P61619 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.27□□□□□ -1.89
SEC61A1P61619 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.27□□□□□ -1.89
SEC61A1P61619 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.27□□□□□ -1.89
SEC61A1P61619 AC107953.1-201ENST00000522216 297 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.27□□□□□ -1.89
SEC61A1P61619 AC018630.1-201ENST00000541376 925 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
SEC61A1P61619 AC090877.1-201ENST00000561418 344 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.27□□□□□ -1.89
SEC61A1P61619 RPS3AP23-202ENST00000574601 686 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.27□□□□□ -1.89
SEC61A1P61619 MIR5047-201ENST00000579212 100 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 MIR4719-201ENST00000585233 84 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 AC005261.5-201ENST00000596280 355 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.27□□□□□ -1.89
SEC61A1P61619 AC010591.1-201ENST00000603941 649 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.27□□□□□ -1.89
SEC61A1P61619 AL136221.1-201ENST00000621449 509 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 AC243312.2-201ENST00000623340 601 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.27□□□□□ -1.89
SEC61A1P61619 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SEC61A1P61619 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SEC61A1P61619 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SEC61A1P61619 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SEC61A1P61619 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SEC61A1P61619 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.26□□□□□ -1.89
SEC61A1P61619 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.26□□□□□ -1.89
SEC61A1P61619 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.26□□□□□ -1.89
SEC61A1P61619 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SEC61A1P61619 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A1P61619 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A1P61619 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SEC61A1P61619 Y_RNA.72-201ENST00000362894 103 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 RNU4-20P-201ENST00000365601 151 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 AL359837.1-201ENST00000381357 287 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 Y_RNA.509-201ENST00000384506 99 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 MIR454-201ENST00000390180 115 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 Y_RNA.615-201ENST00000410769 117 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 RNU6-373P-201ENST00000411247 98 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 RPL21P24-201ENST00000413752 448 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.26□□□□□ -1.89
SEC61A1P61619 DUTP6-201ENST00000425573 462 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 MTND1P14-201ENST00000427400 950 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 TAAR7P-201ENST00000436141 242 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms