Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC103810.6-201ENST00000606708 136 ntBASIC2.27□□□□□ -2.05
VSX2P58304 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.27□□□□□ -2.05
VSX2P58304 PABPC1P9-201ENST00000426076 1612 ntBASIC2.27□□□□□ -2.05
VSX2P58304 AC007785.2-201ENST00000598627 1916 ntBASIC2.27□□□□□ -2.05
VSX2P58304 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VSX2P58304 AC011477.1-204ENST00000623416 1325 ntBASIC2.26□□□□□ -2.05
VSX2P58304 AL161781.1-201ENST00000354277 403 ntBASIC2.26□□□□□ -2.05
VSX2P58304 RNU6-744P-201ENST00000365557 107 ntBASIC2.26□□□□□ -2.05
VSX2P58304 SET-203ENST00000372688 801 ntTSL 2 BASIC2.26□□□□□ -2.05
VSX2P58304 RNU6-1316P-201ENST00000384242 108 ntBASIC2.26□□□□□ -2.05
VSX2P58304 AL109755.1-201ENST00000401791 649 ntBASIC2.26□□□□□ -2.05
VSX2P58304 MIR1290-201ENST00000408735 78 ntBASIC2.26□□□□□ -2.05
VSX2P58304 USP9YP33-201ENST00000412220 421 ntBASIC2.26□□□□□ -2.05
VSX2P58304 MTCYBP38-201ENST00000417160 1123 ntBASIC2.26□□□□□ -2.05
VSX2P58304 USP9YP35-201ENST00000435696 412 ntBASIC2.26□□□□□ -2.05
VSX2P58304 AL117351.1-201ENST00000438864 766 ntBASIC2.26□□□□□ -2.05
VSX2P58304 BNIP3P2-201ENST00000441221 577 ntBASIC2.26□□□□□ -2.05
VSX2P58304 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.26□□□□□ -2.05
VSX2P58304 MTCYBP3-201ENST00000445588 1137 ntBASIC2.26□□□□□ -2.05
VSX2P58304 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.26□□□□□ -2.05
VSX2P58304 HIGD1AP2-201ENST00000446367 280 ntBASIC2.26□□□□□ -2.05
VSX2P58304 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.26□□□□□ -2.05
VSX2P58304 FCF1P6-201ENST00000456841 595 ntBASIC2.26□□□□□ -2.05
VSX2P58304 RBM43P1-201ENST00000476891 1081 ntBASIC2.26□□□□□ -2.05
VSX2P58304 AC021382.1-201ENST00000483523 359 ntBASIC2.26□□□□□ -2.05
VSX2P58304 FAM172BP-201ENST00000487497 1089 ntBASIC2.26□□□□□ -2.05
VSX2P58304 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.26□□□□□ -2.05
VSX2P58304 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.26□□□□□ -2.05
VSX2P58304 RNA5SP82-201ENST00000516707 92 ntBASIC2.26□□□□□ -2.05
VSX2P58304 NRON-201ENST00000517270 370 ntBASIC2.26□□□□□ -2.05
VSX2P58304 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.26□□□□□ -2.05
VSX2P58304 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.26□□□□□ -2.05
VSX2P58304 PRELID2P1-201ENST00000552837 301 ntBASIC2.26□□□□□ -2.05
VSX2P58304 AC010546.1-201ENST00000569391 485 ntBASIC2.26□□□□□ -2.05
VSX2P58304 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.26□□□□□ -2.05
VSX2P58304 RNU4-5P-201ENST00000607255 135 ntBASIC2.26□□□□□ -2.05
VSX2P58304 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.26□□□□□ -2.05
VSX2P58304 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
VSX2P58304 AL445984.1-201ENST00000637834 659 ntBASIC2.26□□□□□ -2.05
VSX2P58304 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
VSX2P58304 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
VSX2P58304 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
VSX2P58304 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VSX2P58304 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
VSX2P58304 AL139276.1-201ENST00000311910 1001 ntBASIC2.25□□□□□ -2.05
VSX2P58304 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VSX2P58304 Y_RNA.465-201ENST00000384293 102 ntBASIC2.25□□□□□ -2.05
VSX2P58304 RN7SKP140-201ENST00000411196 284 ntBASIC2.25□□□□□ -2.05
VSX2P58304 AC007064.1-201ENST00000412238 351 ntBASIC2.25□□□□□ -2.05
VSX2P58304 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.25□□□□□ -2.05
VSX2P58304 AL356867.1-201ENST00000429623 299 ntBASIC2.25□□□□□ -2.05
VSX2P58304 RPS15AP7-201ENST00000439294 405 ntBASIC2.25□□□□□ -2.05
VSX2P58304 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.25□□□□□ -2.05
VSX2P58304 RNA5SP281-201ENST00000516504 135 ntBASIC2.25□□□□□ -2.05
VSX2P58304 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.25□□□□□ -2.05
VSX2P58304 MTND2P7-201ENST00000521337 640 ntBASIC2.25□□□□□ -2.05
VSX2P58304 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.25□□□□□ -2.05
VSX2P58304 OR5BN1P-201ENST00000532955 829 ntBASIC2.25□□□□□ -2.05
VSX2P58304 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
VSX2P58304 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VSX2P58304 HMGB1P14-201ENST00000557424 591 ntBASIC2.25□□□□□ -2.05
VSX2P58304 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.25□□□□□ -2.05
VSX2P58304 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.25□□□□□ -2.05
VSX2P58304 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.25□□□□□ -2.05
VSX2P58304 AC090616.3-201ENST00000582184 217 ntBASIC2.25□□□□□ -2.05
VSX2P58304 UBE2L4-201ENST00000587688 464 ntBASIC2.25□□□□□ -2.05
VSX2P58304 AL139344.1-201ENST00000605228 195 ntBASIC2.25□□□□□ -2.05
VSX2P58304 AC080013.3-201ENST00000606839 578 ntBASIC2.25□□□□□ -2.05
VSX2P58304 AC109809.1-201ENST00000619665 545 ntBASIC2.25□□□□□ -2.05
VSX2P58304 AL158801.5-201ENST00000623123 465 ntBASIC2.25□□□□□ -2.05
VSX2P58304 AC064859.1-201ENST00000624741 174 ntBASIC2.25□□□□□ -2.05
VSX2P58304 AC019226.1-201ENST00000625666 515 ntBASIC2.25□□□□□ -2.05
VSX2P58304 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
VSX2P58304 AC099063.3-201ENST00000642066 185 ntBASIC2.25□□□□□ -2.05
VSX2P58304 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
VSX2P58304 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VSX2P58304 MTND4P9-201ENST00000507819 1346 ntBASIC2.24□□□□□ -2.05
VSX2P58304 ZNF29P-201ENST00000225587 168 ntBASIC2.24□□□□□ -2.05
VSX2P58304 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VSX2P58304 MIR21-201ENST00000362134 72 ntBASIC2.24□□□□□ -2.05
VSX2P58304 RNU4-68P-201ENST00000364314 141 ntBASIC2.24□□□□□ -2.05
VSX2P58304 U8.8-201ENST00000365399 135 ntBASIC2.24□□□□□ -2.05
VSX2P58304 SNORA70B-201ENST00000384210 135 ntBASIC2.24□□□□□ -2.05
VSX2P58304 SNORA80E-201ENST00000384744 137 ntBASIC2.24□□□□□ -2.05
VSX2P58304 MIR620-201ENST00000385232 95 ntBASIC2.24□□□□□ -2.05
VSX2P58304 RNU4-53P-201ENST00000410828 140 ntBASIC2.24□□□□□ -2.05
VSX2P58304 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.24□□□□□ -2.05
VSX2P58304 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.24□□□□□ -2.05
VSX2P58304 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.24□□□□□ -2.05
VSX2P58304 CBWD4P-201ENST00000445695 655 ntBASIC2.24□□□□□ -2.05
VSX2P58304 AL009048.1-201ENST00000450437 298 ntBASIC2.24□□□□□ -2.05
VSX2P58304 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.24□□□□□ -2.05
VSX2P58304 USP9YP25-201ENST00000457708 443 ntBASIC2.24□□□□□ -2.05
VSX2P58304 RPS20P20-201ENST00000460498 340 ntBASIC2.24□□□□□ -2.05
VSX2P58304 LINC00888-204ENST00000487386 421 ntBASIC2.24□□□□□ -2.05
VSX2P58304 RPS29P20-201ENST00000489592 171 ntBASIC2.24□□□□□ -2.05
VSX2P58304 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.24□□□□□ -2.05
VSX2P58304 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.24□□□□□ -2.05
VSX2P58304 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.24□□□□□ -2.05
VSX2P58304 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms