Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.41□□□□□ -2.02
CDH6P55285 AL451054.2-201ENST00000420896 202 ntBASIC2.41□□□□□ -2.02
CDH6P55285 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH6P55285 USP9YP11-201ENST00000427537 717 ntBASIC2.41□□□□□ -2.02
CDH6P55285 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.41□□□□□ -2.02
CDH6P55285 CR769767.1-201ENST00000436337 346 ntBASIC2.41□□□□□ -2.02
CDH6P55285 Z80107.1-201ENST00000436830 412 ntBASIC2.41□□□□□ -2.02
CDH6P55285 RPL35AP22-201ENST00000436855 335 ntBASIC2.41□□□□□ -2.02
CDH6P55285 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CDH6P55285 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.41□□□□□ -2.02
CDH6P55285 AC107626.1-201ENST00000471084 183 ntBASIC2.41□□□□□ -2.02
CDH6P55285 RN7SL636P-201ENST00000497504 294 ntBASIC2.41□□□□□ -2.02
CDH6P55285 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CDH6P55285 AC021451.1-201ENST00000523498 1129 ntBASIC2.41□□□□□ -2.02
CDH6P55285 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH6P55285 OR4K7P-201ENST00000580232 945 ntBASIC2.41□□□□□ -2.02
CDH6P55285 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.41□□□□□ -2.02
CDH6P55285 AL139344.1-201ENST00000605228 195 ntBASIC2.41□□□□□ -2.02
CDH6P55285 MIR6895-201ENST00000613497 78 ntBASIC2.41□□□□□ -2.02
CDH6P55285 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.41□□□□□ -2.02
CDH6P55285 AC106858.1-201ENST00000637497 429 ntBASIC2.41□□□□□ -2.02
CDH6P55285 MIR7515-201ENST00000637837 67 ntBASIC2.41□□□□□ -2.02
CDH6P55285 LINC02211-204ENST00000642024 1070 ntBASIC2.41□□□□□ -2.02
CDH6P55285 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDH6P55285 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CDH6P55285 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDH6P55285 DDX43P2-201ENST00000604753 1354 ntBASIC2.4□□□□□ -2.02
CDH6P55285 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
CDH6P55285 RNU6-223P-201ENST00000362830 107 ntBASIC2.4□□□□□ -2.03
CDH6P55285 SNORD116-12-201ENST00000384468 92 ntBASIC2.4□□□□□ -2.03
CDH6P55285 RPL23AP29-201ENST00000397284 453 ntBASIC2.4□□□□□ -2.03
CDH6P55285 UBE2V1P2-201ENST00000397758 440 ntBASIC2.4□□□□□ -2.03
CDH6P55285 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.4□□□□□ -2.03
CDH6P55285 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH6P55285 AL953862.1-201ENST00000423016 168 ntBASIC2.4□□□□□ -2.03
CDH6P55285 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.4□□□□□ -2.03
CDH6P55285 RPS15AP5-201ENST00000436276 388 ntBASIC2.4□□□□□ -2.03
CDH6P55285 UBE2V1P13-201ENST00000436983 439 ntBASIC2.4□□□□□ -2.03
CDH6P55285 SNRPEP7-201ENST00000438350 220 ntBASIC2.4□□□□□ -2.03
CDH6P55285 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH6P55285 AC011753.1-201ENST00000451001 220 ntBASIC2.4□□□□□ -2.03
CDH6P55285 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.4□□□□□ -2.03
CDH6P55285 RPL26P9-201ENST00000457466 433 ntBASIC2.4□□□□□ -2.03
CDH6P55285 AC024589.1-201ENST00000512207 263 ntBASIC2.4□□□□□ -2.03
CDH6P55285 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH6P55285 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.4□□□□□ -2.03
CDH6P55285 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.4□□□□□ -2.03
CDH6P55285 RNA5SP402-201ENST00000517148 110 ntBASIC2.4□□□□□ -2.03
CDH6P55285 SCARNA11.3-201ENST00000517276 130 ntBASIC2.4□□□□□ -2.03
CDH6P55285 AC087241.2-201ENST00000535801 324 ntBASIC2.4□□□□□ -2.03
CDH6P55285 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.4□□□□□ -2.03
CDH6P55285 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH6P55285 MIR4658-201ENST00000584344 65 ntBASIC2.4□□□□□ -2.03
CDH6P55285 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH6P55285 AC135507.1-201ENST00000607214 561 ntBASIC2.4□□□□□ -2.03
CDH6P55285 PART1_2.1-201ENST00000612397 250 ntBASIC2.4□□□□□ -2.03
CDH6P55285 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.4□□□□□ -2.03
CDH6P55285 AC009159.1-201ENST00000618386 642 ntBASIC2.4□□□□□ -2.03
CDH6P55285 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.4□□□□□ -2.03
CDH6P55285 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CDH6P55285 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDH6P55285 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDH6P55285 OR5H15-201ENST00000383696 930 ntBASIC2.39□□□□□ -2.03
CDH6P55285 SNORA67.4-201ENST00000384688 142 ntBASIC2.39□□□□□ -2.03
CDH6P55285 MIR524-201ENST00000385242 87 ntBASIC2.39□□□□□ -2.03
CDH6P55285 MIR1284-201ENST00000408337 120 ntBASIC2.39□□□□□ -2.03
CDH6P55285 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH6P55285 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH6P55285 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH6P55285 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH6P55285 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH6P55285 AC104982.1-201ENST00000478775 574 ntBASIC2.39□□□□□ -2.03
CDH6P55285 EIF4EP3-201ENST00000498782 656 ntBASIC2.39□□□□□ -2.03
CDH6P55285 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH6P55285 AC119751.5-201ENST00000514077 770 ntBASIC2.39□□□□□ -2.03
CDH6P55285 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.39□□□□□ -2.03
CDH6P55285 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.39□□□□□ -2.03
CDH6P55285 AC091163.3-201ENST00000518269 1144 ntBASIC2.39□□□□□ -2.03
CDH6P55285 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH6P55285 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH6P55285 AC007115.1-201ENST00000546853 234 ntBASIC2.39□□□□□ -2.03
CDH6P55285 AC078814.3-201ENST00000553036 491 ntBASIC2.39□□□□□ -2.03
CDH6P55285 MIR5007-201ENST00000583098 95 ntBASIC2.39□□□□□ -2.03
CDH6P55285 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH6P55285 BNIP3P27-201ENST00000599991 412 ntBASIC2.39□□□□□ -2.03
CDH6P55285 MTND4LP5-201ENST00000605152 292 ntBASIC2.39□□□□□ -2.03
CDH6P55285 TUG1_2.1-201ENST00000614234 87 ntBASIC2.39□□□□□ -2.03
CDH6P55285 SDR42E1P2-201ENST00000614861 481 ntBASIC2.39□□□□□ -2.03
CDH6P55285 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH6P55285 AL160394.1-201ENST00000624765 724 ntBASIC2.39□□□□□ -2.03
CDH6P55285 AC013437.2-201ENST00000639587 677 ntBASIC2.39□□□□□ -2.03
CDH6P55285 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CDH6P55285 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDH6P55285 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDH6P55285 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH6P55285 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH6P55285 AC007336.1-201ENST00000576365 3828 ntBASIC2.38□□□□□ -2.03
CDH6P55285 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH6P55285 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH6P55285 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms