Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC024940.5-201ENST00000622889 474 ntBASIC3.83□□□□□ -1.8
COPB1P53618 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.83□□□□□ -1.8
COPB1P53618 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.83□□□□□ -1.8
COPB1P53618 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.83□□□□□ -1.8
COPB1P53618 AC006020.1-201ENST00000420179 1854 ntBASIC3.83□□□□□ -1.8
COPB1P53618 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COPB1P53618 MFSD8-233ENST00000641482 4860 ntBASIC3.83□□□□□ -1.8
COPB1P53618 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.82□□□□□ -1.8
COPB1P53618 AC244517.1-201ENST00000606030 2086 ntBASIC3.82□□□□□ -1.8
COPB1P53618 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COPB1P53618 MTND4P12-201ENST00000498999 1377 ntBASIC3.82□□□□□ -1.8
COPB1P53618 RPL7P26-201ENST00000333817 754 ntBASIC3.82□□□□□ -1.8
COPB1P53618 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.82□□□□□ -1.8
COPB1P53618 RNU6-637P-201ENST00000384050 107 ntBASIC3.82□□□□□ -1.8
COPB1P53618 AL354719.1-201ENST00000406535 843 ntBASIC3.82□□□□□ -1.8
COPB1P53618 RNU6-1068P-201ENST00000410958 103 ntBASIC3.82□□□□□ -1.8
COPB1P53618 OR51A5P-201ENST00000415429 942 ntBASIC3.82□□□□□ -1.8
COPB1P53618 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.82□□□□□ -1.8
COPB1P53618 RPS12P23-201ENST00000419579 400 ntBASIC3.82□□□□□ -1.8
COPB1P53618 OR2AS1P-201ENST00000427827 319 ntBASIC3.82□□□□□ -1.8
COPB1P53618 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.82□□□□□ -1.8
COPB1P53618 RPL35AP22-201ENST00000436855 335 ntBASIC3.82□□□□□ -1.8
COPB1P53618 AC098614.3-201ENST00000438957 440 ntBASIC3.82□□□□□ -1.8
COPB1P53618 DDX3P2-201ENST00000446138 111 ntBASIC3.82□□□□□ -1.8
COPB1P53618 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.82□□□□□ -1.8
COPB1P53618 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.82□□□□□ -1.8
COPB1P53618 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.82□□□□□ -1.8
COPB1P53618 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.82□□□□□ -1.8
COPB1P53618 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.82□□□□□ -1.8
COPB1P53618 RNA5SP401-201ENST00000515920 127 ntBASIC3.82□□□□□ -1.8
COPB1P53618 RNU6-1095P-201ENST00000516148 108 ntBASIC3.82□□□□□ -1.8
COPB1P53618 RNU6-64P-201ENST00000517119 105 ntBASIC3.82□□□□□ -1.8
COPB1P53618 IGKV2-23-201ENST00000518729 323 ntBASIC3.82□□□□□ -1.8
COPB1P53618 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.82□□□□□ -1.8
COPB1P53618 ARL2BPP2-201ENST00000550907 489 ntBASIC3.82□□□□□ -1.8
COPB1P53618 RPL21P12-201ENST00000559810 515 ntBASIC3.82□□□□□ -1.8
COPB1P53618 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.82□□□□□ -1.8
COPB1P53618 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.82□□□□□ -1.8
COPB1P53618 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.82□□□□□ -1.8
COPB1P53618 AC006254.3-201ENST00000603353 884 ntBASIC3.82□□□□□ -1.8
COPB1P53618 C8orf59P2-201ENST00000603441 271 ntBASIC3.82□□□□□ -1.8
COPB1P53618 AC012531.5-201ENST00000611375 151 ntBASIC3.82□□□□□ -1.8
COPB1P53618 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.82□□□□□ -1.8
COPB1P53618 AL391261.4-201ENST00000616012 481 ntBASIC3.82□□□□□ -1.8
COPB1P53618 AC110801.1-201ENST00000623590 212 ntBASIC3.82□□□□□ -1.8
COPB1P53618 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.82□□□□□ -1.8
COPB1P53618 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COPB1P53618 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COPB1P53618 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.81□□□□□ -1.8
COPB1P53618 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
COPB1P53618 AL354685.2-201ENST00000448218 1447 ntBASIC3.81□□□□□ -1.8
COPB1P53618 RNU6-525P-201ENST00000363685 104 ntBASIC3.81□□□□□ -1.8
COPB1P53618 RNA5SP387-201ENST00000364226 106 ntBASIC3.81□□□□□ -1.8
COPB1P53618 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.81□□□□□ -1.8
COPB1P53618 Y_RNA.333-201ENST00000365274 102 ntBASIC3.81□□□□□ -1.8
COPB1P53618 RNU4-48P-201ENST00000365559 182 ntBASIC3.81□□□□□ -1.8
COPB1P53618 MIR135A2-201ENST00000384854 100 ntBASIC3.81□□□□□ -1.8
COPB1P53618 AL591416.1-201ENST00000404015 867 ntBASIC3.81□□□□□ -1.8
COPB1P53618 AL583834.1-201ENST00000406943 343 ntBASIC3.81□□□□□ -1.8
COPB1P53618 RNA5SP118-201ENST00000410385 109 ntBASIC3.81□□□□□ -1.8
COPB1P53618 RNA5SP31-201ENST00000411144 127 ntBASIC3.81□□□□□ -1.8
COPB1P53618 RNA5SP107-201ENST00000411358 122 ntBASIC3.81□□□□□ -1.8
COPB1P53618 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.81□□□□□ -1.8
COPB1P53618 SDCBPP3-201ENST00000419629 891 ntBASIC3.81□□□□□ -1.8
COPB1P53618 BEND7P1-201ENST00000422058 457 ntBASIC3.81□□□□□ -1.8
COPB1P53618 MED13P1-201ENST00000428342 171 ntBASIC3.81□□□□□ -1.8
COPB1P53618 MTATP6P16-201ENST00000434543 526 ntBASIC3.81□□□□□ -1.8
COPB1P53618 MTND4LP16-201ENST00000440828 295 ntBASIC3.81□□□□□ -1.8
COPB1P53618 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.81□□□□□ -1.8
COPB1P53618 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.81□□□□□ -1.8
COPB1P53618 AC006539.3-201ENST00000454258 129 ntBASIC3.81□□□□□ -1.8
COPB1P53618 CEACAMP4-201ENST00000457676 421 ntBASIC3.81□□□□□ -1.8
COPB1P53618 snoU13.24-201ENST00000458998 104 ntBASIC3.81□□□□□ -1.8
COPB1P53618 RPS20P20-201ENST00000460498 340 ntBASIC3.81□□□□□ -1.8
COPB1P53618 RPL7P49-201ENST00000471402 708 ntBASIC3.81□□□□□ -1.8
COPB1P53618 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.81□□□□□ -1.8
COPB1P53618 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.81□□□□□ -1.8
COPB1P53618 RNU2-10P-201ENST00000516375 211 ntBASIC3.81□□□□□ -1.8
COPB1P53618 TRMT10BP1-201ENST00000519377 943 ntBASIC3.81□□□□□ -1.8
COPB1P53618 CENPUP1-201ENST00000526649 1202 ntBASIC3.81□□□□□ -1.8
COPB1P53618 OR5B19P-201ENST00000531766 928 ntBASIC3.81□□□□□ -1.8
COPB1P53618 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.81□□□□□ -1.8
COPB1P53618 AC128657.1-201ENST00000549459 145 ntBASIC3.81□□□□□ -1.8
COPB1P53618 BNIP3P10-201ENST00000605360 577 ntBASIC3.81□□□□□ -1.8
COPB1P53618 SNORA51-201ENST00000606420 132 ntBASIC3.81□□□□□ -1.8
COPB1P53618 DISC2.1-201ENST00000612827 205 ntBASIC3.81□□□□□ -1.8
COPB1P53618 AC063943.3-201ENST00000615562 356 ntBASIC3.81□□□□□ -1.8
COPB1P53618 AL354950.2-201ENST00000617939 290 ntBASIC3.81□□□□□ -1.8
COPB1P53618 AC039056.2-201ENST00000622261 511 ntBASIC3.81□□□□□ -1.8
COPB1P53618 AC099654.5-201ENST00000636479 350 ntBASIC3.81□□□□□ -1.8
COPB1P53618 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.81□□□□□ -1.8
COPB1P53618 AC073544.1-201ENST00000600110 1595 ntBASIC3.8□□□□□ -1.8
COPB1P53618 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
COPB1P53618 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COPB1P53618 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COPB1P53618 SNORA63.1-201ENST00000362493 131 ntBASIC3.8□□□□□ -1.8
COPB1P53618 SNORA71.3-201ENST00000362582 128 ntBASIC3.8□□□□□ -1.8
COPB1P53618 RNU6-1155P-201ENST00000363554 107 ntBASIC3.8□□□□□ -1.8
COPB1P53618 RNU6-694P-201ENST00000364071 147 ntBASIC3.8□□□□□ -1.8
COPB1P53618 Y_RNA.255-201ENST00000364581 97 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms