Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 OR4H12P-201ENST00000556269 907 ntBASIC3.11□□□□□ -1.91
PDX1P52945 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.11□□□□□ -1.91
PDX1P52945 ZNF192P1-203ENST00000565888 810 ntBASIC3.11□□□□□ -1.91
PDX1P52945 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.11□□□□□ -1.91
PDX1P52945 AP000254.1-201ENST00000609934 520 ntBASIC3.11□□□□□ -1.91
PDX1P52945 AL110115.1-201ENST00000614396 364 ntBASIC3.11□□□□□ -1.91
PDX1P52945 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.11□□□□□ -1.91
PDX1P52945 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDX1P52945 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.11□□□□□ -1.91
PDX1P52945 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.1□□□□□ -1.91
PDX1P52945 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PDX1P52945 AL672296.1-201ENST00000427780 2158 ntBASIC3.1□□□□□ -1.91
PDX1P52945 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PDX1P52945 DEFB108F-201ENST00000344638 222 ntBASIC3.1□□□□□ -1.91
PDX1P52945 RNU6-223P-201ENST00000362830 107 ntBASIC3.1□□□□□ -1.91
PDX1P52945 RNU6-511P-201ENST00000363496 107 ntBASIC3.1□□□□□ -1.91
PDX1P52945 MRPL42P2-201ENST00000403169 426 ntBASIC3.1□□□□□ -1.91
PDX1P52945 RNU2-36P-201ENST00000410361 191 ntBASIC3.1□□□□□ -1.91
PDX1P52945 RNA5SP31-201ENST00000411144 127 ntBASIC3.1□□□□□ -1.91
PDX1P52945 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.1□□□□□ -1.91
PDX1P52945 AC008850.1-201ENST00000427546 362 ntBASIC3.1□□□□□ -1.91
PDX1P52945 RPL31P35-201ENST00000431058 377 ntBASIC3.1□□□□□ -1.91
PDX1P52945 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.1□□□□□ -1.91
PDX1P52945 AC025750.2-201ENST00000442609 450 ntBASIC3.1□□□□□ -1.91
PDX1P52945 AC006539.3-201ENST00000454258 129 ntBASIC3.1□□□□□ -1.91
PDX1P52945 HMGN1P18-201ENST00000457642 277 ntBASIC3.1□□□□□ -1.91
PDX1P52945 RPL21P104-201ENST00000464143 478 ntBASIC3.1□□□□□ -1.91
PDX1P52945 RPS4XP22-201ENST00000480755 780 ntBASIC3.1□□□□□ -1.91
PDX1P52945 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PDX1P52945 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.1□□□□□ -1.91
PDX1P52945 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PDX1P52945 Y_RNA.655-201ENST00000515919 96 ntBASIC3.1□□□□□ -1.91
PDX1P52945 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.1□□□□□ -1.91
PDX1P52945 RNU6-430P-201ENST00000517078 107 ntBASIC3.1□□□□□ -1.91
PDX1P52945 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.1□□□□□ -1.91
PDX1P52945 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.1□□□□□ -1.91
PDX1P52945 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.1□□□□□ -1.91
PDX1P52945 AL845331.3-202ENST00000562856 261 ntBASIC3.1□□□□□ -1.91
PDX1P52945 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.1□□□□□ -1.91
PDX1P52945 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.1□□□□□ -1.91
PDX1P52945 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.1□□□□□ -1.91
PDX1P52945 DUXAP4-201ENST00000603046 613 ntBASIC3.1□□□□□ -1.91
PDX1P52945 AC093732.2-201ENST00000607950 274 ntBASIC3.1□□□□□ -1.91
PDX1P52945 AC090132.2-201ENST00000615881 347 ntBASIC3.1□□□□□ -1.91
PDX1P52945 AC018692.3-201ENST00000623929 123 ntBASIC3.1□□□□□ -1.91
PDX1P52945 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PDX1P52945 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PDX1P52945 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.1□□□□□ -1.91
PDX1P52945 AP001148.1-201ENST00000624124 2359 ntBASIC3.1□□□□□ -1.91
PDX1P52945 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PDX1P52945 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PDX1P52945 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.91
PDX1P52945 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.09□□□□□ -1.91
PDX1P52945 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PDX1P52945 RNU1-75P-201ENST00000347264 129 ntBASIC3.09□□□□□ -1.91
PDX1P52945 SNORA7.4-201ENST00000384249 137 ntBASIC3.09□□□□□ -1.91
PDX1P52945 SNORA54-201ENST00000384281 123 ntBASIC3.09□□□□□ -1.91
PDX1P52945 TXNP7-201ENST00000406296 293 ntBASIC3.09□□□□□ -1.91
PDX1P52945 RNU2-16P-201ENST00000410712 136 ntBASIC3.09□□□□□ -1.91
PDX1P52945 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.09□□□□□ -1.91
PDX1P52945 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.09□□□□□ -1.91
PDX1P52945 AC018630.2-202ENST00000422992 927 ntBASIC3.09□□□□□ -1.91
PDX1P52945 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.09□□□□□ -1.91
PDX1P52945 AC119618.1-201ENST00000434191 222 ntBASIC3.09□□□□□ -1.91
PDX1P52945 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.09□□□□□ -1.91
PDX1P52945 HMGB3P11-201ENST00000440127 604 ntBASIC3.09□□□□□ -1.91
PDX1P52945 AC016696.1-201ENST00000446949 318 ntBASIC3.09□□□□□ -1.91
PDX1P52945 AC079448.1-201ENST00000449377 373 ntBASIC3.09□□□□□ -1.91
PDX1P52945 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.09□□□□□ -1.91
PDX1P52945 RPL31P60-201ENST00000478450 367 ntBASIC3.09□□□□□ -1.91
PDX1P52945 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.09□□□□□ -1.91
PDX1P52945 AC008885.1-201ENST00000514930 301 ntBASIC3.09□□□□□ -1.91
PDX1P52945 RNU6-405P-201ENST00000516637 110 ntBASIC3.09□□□□□ -1.91
PDX1P52945 AC022616.3-201ENST00000523940 148 ntBASIC3.09□□□□□ -1.91
PDX1P52945 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.09□□□□□ -1.91
PDX1P52945 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.09□□□□□ -1.91
PDX1P52945 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.09□□□□□ -1.91
PDX1P52945 AL391156.1-201ENST00000554965 554 ntBASIC3.09□□□□□ -1.91
PDX1P52945 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.09□□□□□ -1.91
PDX1P52945 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.09□□□□□ -1.91
PDX1P52945 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.09□□□□□ -1.91
PDX1P52945 AC015917.1-201ENST00000579654 510 ntBASIC3.09□□□□□ -1.91
PDX1P52945 MIR4672-201ENST00000583126 81 ntBASIC3.09□□□□□ -1.91
PDX1P52945 AL161729.4-201ENST00000604650 476 ntBASIC3.09□□□□□ -1.91
PDX1P52945 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.09□□□□□ -1.91
PDX1P52945 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.09□□□□□ -1.91
PDX1P52945 AL157817.1-201ENST00000614264 790 ntBASIC3.09□□□□□ -1.91
PDX1P52945 AC010133.1-201ENST00000615809 842 ntBASIC3.09□□□□□ -1.91
PDX1P52945 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PDX1P52945 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PDX1P52945 FARSBP1-201ENST00000435808 1778 ntBASIC3.09□□□□□ -1.91
PDX1P52945 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
PDX1P52945 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDX1P52945 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.08□□□□□ -1.92
PDX1P52945 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDX1P52945 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.08□□□□□ -1.92
PDX1P52945 AL035425.3-201ENST00000564206 4996 ntBASIC3.08□□□□□ -1.92
PDX1P52945 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDX1P52945 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
PDX1P52945 RNU6-623P-201ENST00000363143 105 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms