Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SNRPGP5-201ENST00000456003 220 ntBASIC4.53□□□□□ -1.68
MRE11P49959 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.53□□□□□ -1.68
MRE11P49959 FTH1P21-201ENST00000512179 511 ntBASIC4.53□□□□□ -1.68
MRE11P49959 AC114797.1-201ENST00000514003 728 ntBASIC4.53□□□□□ -1.68
MRE11P49959 AC016065.2-201ENST00000514530 444 ntBASIC4.53□□□□□ -1.68
MRE11P49959 RN7SKP234-201ENST00000517173 224 ntBASIC4.53□□□□□ -1.68
MRE11P49959 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.53□□□□□ -1.68
MRE11P49959 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.53□□□□□ -1.68
MRE11P49959 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.53□□□□□ -1.68
MRE11P49959 AC005668.1-201ENST00000571142 476 ntBASIC4.53□□□□□ -1.68
MRE11P49959 OR4K8P-201ENST00000578842 1048 ntBASIC4.53□□□□□ -1.68
MRE11P49959 MIR4742-201ENST00000581069 85 ntBASIC4.53□□□□□ -1.68
MRE11P49959 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.53□□□□□ -1.68
MRE11P49959 AC245517.5-201ENST00000611529 162 ntBASIC4.53□□□□□ -1.68
MRE11P49959 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.53□□□□□ -1.68
MRE11P49959 SAGE4P-201ENST00000442271 3381 ntBASIC4.53□□□□□ -1.68
MRE11P49959 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MRE11P49959 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
MRE11P49959 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
MRE11P49959 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.53□□□□□ -1.68
MRE11P49959 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.69
MRE11P49959 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
MRE11P49959 MAPK10-372ENST00000641954 3413 ntBASIC4.52□□□□□ -1.69
MRE11P49959 ASNSP3-201ENST00000451989 1306 ntBASIC4.52□□□□□ -1.69
MRE11P49959 OR5P1P-201ENST00000299512 925 ntBASIC4.52□□□□□ -1.69
MRE11P49959 Y_RNA.138-201ENST00000363462 102 ntBASIC4.52□□□□□ -1.69
MRE11P49959 SNORD35B-201ENST00000363660 87 ntBASIC4.52□□□□□ -1.69
MRE11P49959 Y_RNA.474-201ENST00000384341 102 ntBASIC4.52□□□□□ -1.69
MRE11P49959 SNORA70E-201ENST00000384492 135 ntBASIC4.52□□□□□ -1.69
MRE11P49959 RN7SKP140-201ENST00000411196 284 ntBASIC4.52□□□□□ -1.69
MRE11P49959 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.52□□□□□ -1.69
MRE11P49959 EZH2P1-201ENST00000431167 291 ntBASIC4.52□□□□□ -1.69
MRE11P49959 AC024082.2-201ENST00000434771 238 ntBASIC4.52□□□□□ -1.69
MRE11P49959 AC127537.2-201ENST00000439258 465 ntBASIC4.52□□□□□ -1.69
MRE11P49959 HMGB1P37-201ENST00000439613 609 ntBASIC4.52□□□□□ -1.69
MRE11P49959 PRDX3P3-201ENST00000447765 522 ntBASIC4.52□□□□□ -1.69
MRE11P49959 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.52□□□□□ -1.69
MRE11P49959 HMGB3P8-201ENST00000449709 577 ntBASIC4.52□□□□□ -1.69
MRE11P49959 RPS4XP10-201ENST00000465034 731 ntBASIC4.52□□□□□ -1.69
MRE11P49959 MRPS17P3-201ENST00000465453 385 ntBASIC4.52□□□□□ -1.69
MRE11P49959 AL049714.1-201ENST00000466686 347 ntBASIC4.52□□□□□ -1.69
MRE11P49959 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.52□□□□□ -1.69
MRE11P49959 RPS27AP13-201ENST00000498403 237 ntBASIC4.52□□□□□ -1.69
MRE11P49959 MTND5P5-201ENST00000503764 376 ntBASIC4.52□□□□□ -1.69
MRE11P49959 AC105417.1-201ENST00000514691 285 ntBASIC4.52□□□□□ -1.69
MRE11P49959 RNU4-49P-201ENST00000516080 140 ntBASIC4.52□□□□□ -1.69
MRE11P49959 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.52□□□□□ -1.69
MRE11P49959 RN7SKP60-201ENST00000516985 239 ntBASIC4.52□□□□□ -1.69
MRE11P49959 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.52□□□□□ -1.69
MRE11P49959 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.52□□□□□ -1.69
MRE11P49959 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.52□□□□□ -1.69
MRE11P49959 BNIP3P6-201ENST00000549284 499 ntBASIC4.52□□□□□ -1.69
MRE11P49959 AL121821.2-201ENST00000556081 394 ntBASIC4.52□□□□□ -1.69
MRE11P49959 AC090877.1-201ENST00000561418 344 ntBASIC4.52□□□□□ -1.69
MRE11P49959 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.52□□□□□ -1.69
MRE11P49959 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.52□□□□□ -1.69
MRE11P49959 AP001029.3-201ENST00000588063 596 ntBASIC4.52□□□□□ -1.69
MRE11P49959 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.52□□□□□ -1.69
MRE11P49959 AC004853.1-201ENST00000604902 698 ntBASIC4.52□□□□□ -1.69
MRE11P49959 AC113139.1-201ENST00000605049 239 ntBASIC4.52□□□□□ -1.69
MRE11P49959 AL121992.2-201ENST00000606262 256 ntBASIC4.52□□□□□ -1.69
MRE11P49959 AL133255.1-201ENST00000606374 441 ntBASIC4.52□□□□□ -1.69
MRE11P49959 AC103710.2-201ENST00000609912 942 ntBASIC4.52□□□□□ -1.69
MRE11P49959 AL365204.3-201ENST00000612448 685 ntBASIC4.52□□□□□ -1.69
MRE11P49959 uc_338.13-201ENST00000618243 179 ntBASIC4.52□□□□□ -1.69
MRE11P49959 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.52□□□□□ -1.69
MRE11P49959 AC002550.2-201ENST00000621246 394 ntBASIC4.52□□□□□ -1.69
MRE11P49959 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
MRE11P49959 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MRE11P49959 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
MRE11P49959 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
MRE11P49959 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
MRE11P49959 RLIMP1-201ENST00000339626 1680 ntBASIC4.51□□□□□ -1.69
MRE11P49959 Y_RNA.231-201ENST00000364358 102 ntBASIC4.51□□□□□ -1.69
MRE11P49959 RNA5SP130-201ENST00000364431 114 ntBASIC4.51□□□□□ -1.69
MRE11P49959 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
MRE11P49959 Y_RNA.615-201ENST00000410769 117 ntBASIC4.51□□□□□ -1.69
MRE11P49959 RNU2-62P-201ENST00000410868 191 ntBASIC4.51□□□□□ -1.69
MRE11P49959 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.51□□□□□ -1.69
MRE11P49959 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.51□□□□□ -1.69
MRE11P49959 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.51□□□□□ -1.69
MRE11P49959 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.51□□□□□ -1.69
MRE11P49959 MTND3P16-201ENST00000452205 344 ntBASIC4.51□□□□□ -1.69
MRE11P49959 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.51□□□□□ -1.69
MRE11P49959 HMGB3P30-201ENST00000457863 606 ntBASIC4.51□□□□□ -1.69
MRE11P49959 RNU7-170P-201ENST00000459303 61 ntBASIC4.51□□□□□ -1.69
MRE11P49959 RNU6-329P-201ENST00000459618 107 ntBASIC4.51□□□□□ -1.69
MRE11P49959 TRBV12-2-201ENST00000489763 344 ntBASIC4.51□□□□□ -1.69
MRE11P49959 RPL29P14-201ENST00000495837 428 ntBASIC4.51□□□□□ -1.69
MRE11P49959 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.51□□□□□ -1.69
MRE11P49959 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.51□□□□□ -1.69
MRE11P49959 Y_RNA.691-201ENST00000516611 103 ntBASIC4.51□□□□□ -1.69
MRE11P49959 AC026403.1-201ENST00000518938 295 ntBASIC4.51□□□□□ -1.69
MRE11P49959 SUMO2P20-201ENST00000520803 283 ntBASIC4.51□□□□□ -1.69
MRE11P49959 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.51□□□□□ -1.69
MRE11P49959 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.51□□□□□ -1.69
MRE11P49959 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.51□□□□□ -1.69
MRE11P49959 PSMA3P-201ENST00000555485 635 ntBASIC4.51□□□□□ -1.69
MRE11P49959 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.51□□□□□ -1.69
MRE11P49959 AC025588.3-201ENST00000604182 274 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms