Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.21□□□□□ -1.9
CLK1P49759 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLK1P49759 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLK1P49759 OR4G2P-201ENST00000328113 903 ntBASIC3.21□□□□□ -1.9
CLK1P49759 SNORD9-201ENST00000362566 104 ntBASIC3.21□□□□□ -1.9
CLK1P49759 RNY4P24-201ENST00000362735 96 ntBASIC3.21□□□□□ -1.9
CLK1P49759 RN7SKP226-201ENST00000364912 300 ntBASIC3.21□□□□□ -1.9
CLK1P49759 AL359837.1-201ENST00000381357 287 ntBASIC3.21□□□□□ -1.9
CLK1P49759 SNORA40.3-201ENST00000390964 122 ntBASIC3.21□□□□□ -1.9
CLK1P49759 MIR548F1-201ENST00000408667 84 ntBASIC3.21□□□□□ -1.9
CLK1P49759 RN7SKP111-201ENST00000410349 271 ntBASIC3.21□□□□□ -1.9
CLK1P49759 MTND1P21-201ENST00000412991 285 ntBASIC3.21□□□□□ -1.9
CLK1P49759 TPMTP2-201ENST00000414372 726 ntBASIC3.21□□□□□ -1.9
CLK1P49759 MTND1P23-201ENST00000416931 372 ntBASIC3.21□□□□□ -1.9
CLK1P49759 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.21□□□□□ -1.9
CLK1P49759 AC098614.2-201ENST00000426040 255 ntBASIC3.21□□□□□ -1.9
CLK1P49759 AL445584.1-201ENST00000431451 330 ntBASIC3.21□□□□□ -1.9
CLK1P49759 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.21□□□□□ -1.9
CLK1P49759 PGBD4P3-201ENST00000440731 581 ntBASIC3.21□□□□□ -1.9
CLK1P49759 RBMX2P4-201ENST00000441256 376 ntBASIC3.21□□□□□ -1.9
CLK1P49759 MTND5P14-201ENST00000441481 1267 ntBASIC3.21□□□□□ -1.9
CLK1P49759 SNRPFP4-201ENST00000456366 242 ntBASIC3.21□□□□□ -1.9
CLK1P49759 RPL31P50-201ENST00000471002 296 ntBASIC3.21□□□□□ -1.9
CLK1P49759 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.21□□□□□ -1.9
CLK1P49759 LARP1BP2-201ENST00000486594 519 ntBASIC3.21□□□□□ -1.9
CLK1P49759 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.21□□□□□ -1.9
CLK1P49759 AC113155.1-201ENST00000511141 769 ntBASIC3.21□□□□□ -1.9
CLK1P49759 TTC39CP1-201ENST00000512513 755 ntBASIC3.21□□□□□ -1.9
CLK1P49759 MTND5P4-201ENST00000514978 288 ntBASIC3.21□□□□□ -1.9
CLK1P49759 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.21□□□□□ -1.9
CLK1P49759 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.21□□□□□ -1.9
CLK1P49759 AC087883.1-201ENST00000551882 391 ntBASIC3.21□□□□□ -1.9
CLK1P49759 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.21□□□□□ -1.9
CLK1P49759 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.21□□□□□ -1.9
CLK1P49759 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.21□□□□□ -1.9
CLK1P49759 BNIP3P23-201ENST00000599655 511 ntBASIC3.21□□□□□ -1.9
CLK1P49759 NRBF2P5-201ENST00000603087 788 ntBASIC3.21□□□□□ -1.9
CLK1P49759 PRELID3BP8-201ENST00000604148 295 ntBASIC3.21□□□□□ -1.9
CLK1P49759 AL161729.4-201ENST00000604650 476 ntBASIC3.21□□□□□ -1.9
CLK1P49759 AL627309.6-201ENST00000606857 840 ntBASIC3.21□□□□□ -1.9
CLK1P49759 AL121772.2-201ENST00000614331 297 ntBASIC3.21□□□□□ -1.9
CLK1P49759 AC099654.13-201ENST00000639774 207 ntBASIC3.21□□□□□ -1.9
CLK1P49759 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.21□□□□□ -1.9
CLK1P49759 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLK1P49759 Y_RNA.126-201ENST00000363382 111 ntBASIC3.2□□□□□ -1.9
CLK1P49759 SNORD56.3-201ENST00000363507 71 ntBASIC3.2□□□□□ -1.9
CLK1P49759 RNU6-289P-201ENST00000364093 107 ntBASIC3.2□□□□□ -1.9
CLK1P49759 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLK1P49759 RNU6-1042P-201ENST00000384204 107 ntBASIC3.2□□□□□ -1.9
CLK1P49759 Y_RNA.604-201ENST00000410574 102 ntBASIC3.2□□□□□ -1.9
CLK1P49759 RAB9AP3-201ENST00000412737 573 ntBASIC3.2□□□□□ -1.9
CLK1P49759 EIF1P1-201ENST00000421436 341 ntBASIC3.2□□□□□ -1.9
CLK1P49759 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.2□□□□□ -1.9
CLK1P49759 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.2□□□□□ -1.9
CLK1P49759 AC009414.1-201ENST00000427200 443 ntBASIC3.2□□□□□ -1.9
CLK1P49759 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.2□□□□□ -1.9
CLK1P49759 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.2□□□□□ -1.9
CLK1P49759 OR4K11P-201ENST00000431829 904 ntBASIC3.2□□□□□ -1.9
CLK1P49759 MTCYBP45-201ENST00000435243 565 ntBASIC3.2□□□□□ -1.9
CLK1P49759 SNRPEP7-201ENST00000438350 220 ntBASIC3.2□□□□□ -1.9
CLK1P49759 Z82210.1-201ENST00000440037 231 ntBASIC3.2□□□□□ -1.9
CLK1P49759 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.2□□□□□ -1.9
CLK1P49759 RAB9AP1-201ENST00000449393 573 ntBASIC3.2□□□□□ -1.9
CLK1P49759 PDSS1P2-201ENST00000449397 678 ntBASIC3.2□□□□□ -1.9
CLK1P49759 USP9YP12-201ENST00000450481 570 ntBASIC3.2□□□□□ -1.9
CLK1P49759 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.2□□□□□ -1.9
CLK1P49759 RPL23AP67-201ENST00000465341 474 ntBASIC3.2□□□□□ -1.9
CLK1P49759 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLK1P49759 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.2□□□□□ -1.9
CLK1P49759 RPL23AP70-201ENST00000483361 460 ntBASIC3.2□□□□□ -1.9
CLK1P49759 AC106707.2-201ENST00000484182 374 ntBASIC3.2□□□□□ -1.9
CLK1P49759 HMGB1P36-201ENST00000487709 576 ntBASIC3.2□□□□□ -1.9
CLK1P49759 AC105252.1-201ENST00000503089 286 ntBASIC3.2□□□□□ -1.9
CLK1P49759 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.2□□□□□ -1.9
CLK1P49759 AC091133.4-201ENST00000511142 308 ntBASIC3.2□□□□□ -1.9
CLK1P49759 AF131216.2-201ENST00000512316 564 ntBASIC3.2□□□□□ -1.9
CLK1P49759 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.2□□□□□ -1.9
CLK1P49759 MIR2276-201ENST00000516886 89 ntBASIC3.2□□□□□ -1.9
CLK1P49759 HMGN1P28-201ENST00000521340 364 ntBASIC3.2□□□□□ -1.9
CLK1P49759 AC104027.1-201ENST00000521887 300 ntBASIC3.2□□□□□ -1.9
CLK1P49759 COX6CP8-201ENST00000522620 226 ntBASIC3.2□□□□□ -1.9
CLK1P49759 AC026333.2-201ENST00000542164 106 ntBASIC3.2□□□□□ -1.9
CLK1P49759 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.2□□□□□ -1.9
CLK1P49759 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.2□□□□□ -1.9
CLK1P49759 MIR3913-1-201ENST00000577744 102 ntBASIC3.2□□□□□ -1.9
CLK1P49759 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.2□□□□□ -1.9
CLK1P49759 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.2□□□□□ -1.9
CLK1P49759 AC112191.3-201ENST00000604371 277 ntBASIC3.2□□□□□ -1.9
CLK1P49759 AC109347.2-201ENST00000610220 349 ntBASIC3.2□□□□□ -1.9
CLK1P49759 AL355073.2-201ENST00000612106 557 ntBASIC3.2□□□□□ -1.9
CLK1P49759 AC091834.1-201ENST00000614543 472 ntBASIC3.2□□□□□ -1.9
CLK1P49759 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.2□□□□□ -1.9
CLK1P49759 AC009093.8-201ENST00000641769 292 ntBASIC3.2□□□□□ -1.9
CLK1P49759 AC093908.1-201ENST00000623125 8092 ntBASIC3.2□□□□□ -1.9
CLK1P49759 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.2□□□□□ -1.9
CLK1P49759 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.2□□□□□ -1.9
CLK1P49759 ZNF285B-201ENST00000561698 1767 ntBASIC3.2□□□□□ -1.9
CLK1P49759 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.19□□□□□ -1.9
CLK1P49759 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CLK1P49759 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms