Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 snoU109.1-201ENST00000459339 135 ntBASIC3.43□□□□□ -1.86
RXRGP48443 MRPS17P3-201ENST00000465453 385 ntBASIC3.43□□□□□ -1.86
RXRGP48443 AC128713.1-201ENST00000471495 306 ntBASIC3.43□□□□□ -1.86
RXRGP48443 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.43□□□□□ -1.86
RXRGP48443 RPS4XP22-201ENST00000480755 780 ntBASIC3.43□□□□□ -1.86
RXRGP48443 AC092185.1-201ENST00000491371 97 ntBASIC3.43□□□□□ -1.86
RXRGP48443 AC010587.1-201ENST00000505809 469 ntBASIC3.43□□□□□ -1.86
RXRGP48443 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.43□□□□□ -1.86
RXRGP48443 NDUFB4P2-201ENST00000509515 391 ntBASIC3.43□□□□□ -1.86
RXRGP48443 Y_RNA.672-201ENST00000516289 104 ntBASIC3.43□□□□□ -1.86
RXRGP48443 RNU6-677P-201ENST00000516914 101 ntBASIC3.43□□□□□ -1.86
RXRGP48443 RNU6-1092P-201ENST00000516955 87 ntBASIC3.43□□□□□ -1.86
RXRGP48443 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
RXRGP48443 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.43□□□□□ -1.86
RXRGP48443 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.43□□□□□ -1.86
RXRGP48443 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.43□□□□□ -1.86
RXRGP48443 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.43□□□□□ -1.86
RXRGP48443 AC025281.1-201ENST00000567026 265 ntBASIC3.43□□□□□ -1.86
RXRGP48443 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RXRGP48443 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.43□□□□□ -1.86
RXRGP48443 CKS1BP3-201ENST00000600888 237 ntBASIC3.43□□□□□ -1.86
RXRGP48443 BNIP3P9-201ENST00000603714 553 ntBASIC3.43□□□□□ -1.86
RXRGP48443 AL391813.2-201ENST00000609113 322 ntBASIC3.43□□□□□ -1.86
RXRGP48443 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RXRGP48443 MIR7112-201ENST00000616126 65 ntBASIC3.43□□□□□ -1.86
RXRGP48443 AC104010.1-201ENST00000616889 150 ntBASIC3.43□□□□□ -1.86
RXRGP48443 AC092140.2-201ENST00000618027 521 ntBASIC3.43□□□□□ -1.86
RXRGP48443 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.43□□□□□ -1.86
RXRGP48443 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.43□□□□□ -1.86
RXRGP48443 MTND5P27-201ENST00000428871 1720 ntBASIC3.43□□□□□ -1.86
RXRGP48443 ZNF519P1-201ENST00000449011 1626 ntBASIC3.43□□□□□ -1.86
RXRGP48443 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RXRGP48443 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.42□□□□□ -1.86
RXRGP48443 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RXRGP48443 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RXRGP48443 HSPE1P11-201ENST00000339579 310 ntBASIC3.42□□□□□ -1.86
RXRGP48443 RNU6-512P-201ENST00000364438 103 ntBASIC3.42□□□□□ -1.86
RXRGP48443 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RXRGP48443 U3.39-201ENST00000408569 239 ntBASIC3.42□□□□□ -1.86
RXRGP48443 MIR1289-1-201ENST00000408836 144 ntBASIC3.42□□□□□ -1.86
RXRGP48443 RNA5SP293-201ENST00000410527 113 ntBASIC3.42□□□□□ -1.86
RXRGP48443 RNU6-55P-201ENST00000411092 107 ntBASIC3.42□□□□□ -1.86
RXRGP48443 RNU6-954P-201ENST00000411355 107 ntBASIC3.42□□□□□ -1.86
RXRGP48443 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.42□□□□□ -1.86
RXRGP48443 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.42□□□□□ -1.86
RXRGP48443 BX679664.1-201ENST00000434429 253 ntBASIC3.42□□□□□ -1.86
RXRGP48443 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.42□□□□□ -1.86
RXRGP48443 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.42□□□□□ -1.86
RXRGP48443 RPL23AP58-201ENST00000440453 469 ntBASIC3.42□□□□□ -1.86
RXRGP48443 RPS15AP27-201ENST00000449183 343 ntBASIC3.42□□□□□ -1.86
RXRGP48443 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.42□□□□□ -1.86
RXRGP48443 BET1P1-201ENST00000482276 359 ntBASIC3.42□□□□□ -1.86
RXRGP48443 RNA5SP165-201ENST00000517142 115 ntBASIC3.42□□□□□ -1.86
RXRGP48443 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.42□□□□□ -1.86
RXRGP48443 AC022634.1-201ENST00000520765 532 ntBASIC3.42□□□□□ -1.86
RXRGP48443 AP006587.4-201ENST00000526053 529 ntBASIC3.42□□□□□ -1.86
RXRGP48443 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.42□□□□□ -1.86
RXRGP48443 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.42□□□□□ -1.86
RXRGP48443 RPL21P5-201ENST00000554662 472 ntBASIC3.42□□□□□ -1.86
RXRGP48443 AC135628.1-201ENST00000568867 534 ntBASIC3.42□□□□□ -1.86
RXRGP48443 AC012493.2-201ENST00000595083 291 ntBASIC3.42□□□□□ -1.86
RXRGP48443 AC012065.4-201ENST00000602445 679 ntBASIC3.42□□□□□ -1.86
RXRGP48443 MTND4LP5-201ENST00000605152 292 ntBASIC3.42□□□□□ -1.86
RXRGP48443 AC068276.1-201ENST00000605793 379 ntBASIC3.42□□□□□ -1.86
RXRGP48443 UCA1.1-201ENST00000620952 75 ntBASIC3.42□□□□□ -1.86
RXRGP48443 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.42□□□□□ -1.86
RXRGP48443 FAM35CP-201ENST00000554755 2470 ntBASIC3.42□□□□□ -1.86
RXRGP48443 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.41□□□□□ -1.86
RXRGP48443 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RXRGP48443 GABRG2-229ENST00000641017 3628 ntBASIC3.41□□□□□ -1.86
RXRGP48443 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RXRGP48443 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RXRGP48443 AC073343.1-201ENST00000328239 651 ntBASIC3.41□□□□□ -1.86
RXRGP48443 RNA5SP42-201ENST00000364278 115 ntBASIC3.41□□□□□ -1.86
RXRGP48443 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RXRGP48443 RNU2-36P-201ENST00000410361 191 ntBASIC3.41□□□□□ -1.86
RXRGP48443 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.41□□□□□ -1.86
RXRGP48443 RPL26P27-201ENST00000414397 437 ntBASIC3.41□□□□□ -1.86
RXRGP48443 ELOCP4-201ENST00000420090 333 ntBASIC3.41□□□□□ -1.86
RXRGP48443 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.41□□□□□ -1.86
RXRGP48443 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.41□□□□□ -1.86
RXRGP48443 AL358075.3-201ENST00000426289 226 ntBASIC3.41□□□□□ -1.86
RXRGP48443 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.41□□□□□ -1.86
RXRGP48443 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.41□□□□□ -1.86
RXRGP48443 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.41□□□□□ -1.86
RXRGP48443 RN7SL594P-201ENST00000470590 287 ntBASIC3.41□□□□□ -1.86
RXRGP48443 RPL36AP51-201ENST00000487216 318 ntBASIC3.41□□□□□ -1.86
RXRGP48443 SNORA31.3-201ENST00000516029 96 ntBASIC3.41□□□□□ -1.86
RXRGP48443 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.41□□□□□ -1.86
RXRGP48443 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.41□□□□□ -1.86
RXRGP48443 AC007834.2-201ENST00000536310 343 ntBASIC3.41□□□□□ -1.86
RXRGP48443 OSBPL9P5-201ENST00000542581 171 ntBASIC3.41□□□□□ -1.86
RXRGP48443 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.41□□□□□ -1.86
RXRGP48443 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.41□□□□□ -1.86
RXRGP48443 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.41□□□□□ -1.86
RXRGP48443 AC109446.2-201ENST00000567872 497 ntBASIC3.41□□□□□ -1.86
RXRGP48443 AC010653.1-201ENST00000571108 881 ntBASIC3.41□□□□□ -1.86
RXRGP48443 HMGN2P15-201ENST00000585707 270 ntBASIC3.41□□□□□ -1.86
RXRGP48443 AC008739.2-201ENST00000597006 317 ntBASIC3.41□□□□□ -1.86
RXRGP48443 AC025594.3-201ENST00000613068 790 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms