Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 APOOP4-201ENST00000513530 597 ntBASIC2.83□□□□□ -1.96
CDX1P47902 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.83□□□□□ -1.96
CDX1P47902 Vault.3-201ENST00000516676 95 ntBASIC2.83□□□□□ -1.96
CDX1P47902 RNA5SP165-201ENST00000517142 115 ntBASIC2.83□□□□□ -1.96
CDX1P47902 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.83□□□□□ -1.96
CDX1P47902 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.83□□□□□ -1.96
CDX1P47902 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.83□□□□□ -1.96
CDX1P47902 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.83□□□□□ -1.96
CDX1P47902 AC073544.2-201ENST00000601155 540 ntBASIC2.83□□□□□ -1.96
CDX1P47902 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.83□□□□□ -1.96
CDX1P47902 BNIP3P9-201ENST00000603714 553 ntBASIC2.83□□□□□ -1.96
CDX1P47902 U3.45-201ENST00000607547 219 ntBASIC2.83□□□□□ -1.96
CDX1P47902 AL732618.1-201ENST00000623251 301 ntBASIC2.83□□□□□ -1.96
CDX1P47902 PISRT1-201ENST00000626175 531 ntBASIC2.83□□□□□ -1.96
CDX1P47902 CU459211.1-201ENST00000635667 749 ntBASIC2.83□□□□□ -1.96
CDX1P47902 AL137003.2-201ENST00000606924 2538 ntBASIC2.83□□□□□ -1.96
CDX1P47902 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDX1P47902 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CDX1P47902 AC091564.4-201ENST00000533934 2194 ntBASIC2.83□□□□□ -1.96
CDX1P47902 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.82□□□□□ -1.96
CDX1P47902 FARSBP1-201ENST00000435808 1778 ntBASIC2.82□□□□□ -1.96
CDX1P47902 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.82□□□□□ -1.96
CDX1P47902 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDX1P47902 AC073343.1-201ENST00000328239 651 ntBASIC2.82□□□□□ -1.96
CDX1P47902 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.82□□□□□ -1.96
CDX1P47902 RNU1-105P-201ENST00000363470 161 ntBASIC2.82□□□□□ -1.96
CDX1P47902 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.82□□□□□ -1.96
CDX1P47902 RNU6-817P-201ENST00000391083 104 ntBASIC2.82□□□□□ -1.96
CDX1P47902 RPS3AP36-201ENST00000398190 775 ntBASIC2.82□□□□□ -1.96
CDX1P47902 MIR888-201ENST00000401186 77 ntBASIC2.82□□□□□ -1.96
CDX1P47902 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.82□□□□□ -1.96
CDX1P47902 AL031121.1-201ENST00000406553 254 ntBASIC2.82□□□□□ -1.96
CDX1P47902 RNU2-68P-201ENST00000410878 191 ntBASIC2.82□□□□□ -1.96
CDX1P47902 RNU6-195P-201ENST00000411352 109 ntBASIC2.82□□□□□ -1.96
CDX1P47902 RPS12P24-201ENST00000412619 387 ntBASIC2.82□□□□□ -1.96
CDX1P47902 HMGB3P20-201ENST00000417997 600 ntBASIC2.82□□□□□ -1.96
CDX1P47902 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.82□□□□□ -1.96
CDX1P47902 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.82□□□□□ -1.96
CDX1P47902 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.82□□□□□ -1.96
CDX1P47902 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CDX1P47902 HMGN2P31-201ENST00000432430 273 ntBASIC2.82□□□□□ -1.96
CDX1P47902 RPL36AP53-201ENST00000432891 316 ntBASIC2.82□□□□□ -1.96
CDX1P47902 AC104850.1-201ENST00000435940 476 ntBASIC2.82□□□□□ -1.96
CDX1P47902 AL022238.1-201ENST00000442557 355 ntBASIC2.82□□□□□ -1.96
CDX1P47902 GAPDHP17-201ENST00000449858 1001 ntBASIC2.82□□□□□ -1.96
CDX1P47902 RPL26P9-201ENST00000457466 433 ntBASIC2.82□□□□□ -1.96
CDX1P47902 RPL31P3-201ENST00000458430 332 ntBASIC2.82□□□□□ -1.96
CDX1P47902 RPS29P12-201ENST00000460178 152 ntBASIC2.82□□□□□ -1.96
CDX1P47902 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.82□□□□□ -1.96
CDX1P47902 AC006483.1-201ENST00000487308 313 ntBASIC2.82□□□□□ -1.96
CDX1P47902 RPL39P36-201ENST00000490784 156 ntBASIC2.82□□□□□ -1.96
CDX1P47902 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.82□□□□□ -1.96
CDX1P47902 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.82□□□□□ -1.96
CDX1P47902 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.82□□□□□ -1.96
CDX1P47902 RAC1P5-201ENST00000512182 576 ntBASIC2.82□□□□□ -1.96
CDX1P47902 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.82□□□□□ -1.96
CDX1P47902 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.82□□□□□ -1.96
CDX1P47902 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.82□□□□□ -1.96
CDX1P47902 AC007536.1-201ENST00000533382 349 ntBASIC2.82□□□□□ -1.96
CDX1P47902 AL391261.3-201ENST00000557194 520 ntBASIC2.82□□□□□ -1.96
CDX1P47902 MIR3944-201ENST00000581277 108 ntBASIC2.82□□□□□ -1.96
CDX1P47902 AC040904.1-201ENST00000590850 223 ntBASIC2.82□□□□□ -1.96
CDX1P47902 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.82□□□□□ -1.96
CDX1P47902 AL358072.1-201ENST00000604156 575 ntBASIC2.82□□□□□ -1.96
CDX1P47902 AP002360.4-201ENST00000606980 481 ntBASIC2.82□□□□□ -1.96
CDX1P47902 AL451064.1-201ENST00000607718 471 ntBASIC2.82□□□□□ -1.96
CDX1P47902 AC099506.2-201ENST00000623074 221 ntBASIC2.82□□□□□ -1.96
CDX1P47902 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDX1P47902 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.82□□□□□ -1.96
CDX1P47902 TEX21P-201ENST00000447107 1476 ntBASIC2.82□□□□□ -1.96
CDX1P47902 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.82□□□□□ -1.96
CDX1P47902 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDX1P47902 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDX1P47902 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.81□□□□□ -1.96
CDX1P47902 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
CDX1P47902 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDX1P47902 SNORA71.3-201ENST00000362582 128 ntBASIC2.81□□□□□ -1.96
CDX1P47902 RNU6-946P-201ENST00000383878 107 ntBASIC2.81□□□□□ -1.96
CDX1P47902 RNU6-297P-201ENST00000384636 107 ntBASIC2.81□□□□□ -1.96
CDX1P47902 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.81□□□□□ -1.96
CDX1P47902 MIR887-201ENST00000401258 79 ntBASIC2.81□□□□□ -1.96
CDX1P47902 RPL5P18-201ENST00000406671 891 ntBASIC2.81□□□□□ -1.96
CDX1P47902 RN7SKP58-201ENST00000411010 305 ntBASIC2.81□□□□□ -1.96
CDX1P47902 BMS1P22-201ENST00000414726 313 ntBASIC2.81□□□□□ -1.96
CDX1P47902 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.81□□□□□ -1.96
CDX1P47902 HMGN2P30-201ENST00000423237 256 ntBASIC2.81□□□□□ -1.96
CDX1P47902 AC073614.1-201ENST00000438690 650 ntBASIC2.81□□□□□ -1.96
CDX1P47902 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.81□□□□□ -1.96
CDX1P47902 CYCSP32-201ENST00000440548 321 ntBASIC2.81□□□□□ -1.96
CDX1P47902 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.81□□□□□ -1.96
CDX1P47902 MTND2P22-201ENST00000444325 1033 ntBASIC2.81□□□□□ -1.96
CDX1P47902 AL136380.1-201ENST00000447970 162 ntBASIC2.81□□□□□ -1.96
CDX1P47902 FABP5P13-201ENST00000452144 328 ntBASIC2.81□□□□□ -1.96
CDX1P47902 RNU6-956P-201ENST00000458868 103 ntBASIC2.81□□□□□ -1.96
CDX1P47902 MRPS17P3-201ENST00000465453 385 ntBASIC2.81□□□□□ -1.96
CDX1P47902 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.81□□□□□ -1.96
CDX1P47902 RPS26P21-201ENST00000475397 348 ntBASIC2.81□□□□□ -1.96
CDX1P47902 RAP1BP2-201ENST00000478270 544 ntBASIC2.81□□□□□ -1.96
CDX1P47902 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.81□□□□□ -1.96
CDX1P47902 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms