Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RNU5E-5P-201ENST00000365379 116 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 SNORD116-1-201ENST00000384335 95 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 RPL7P25-201ENST00000404151 721 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 AC245291.1-201ENST00000419501 328 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.27□□□□□ -1.89
MTHFRP42898 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.27□□□□□ -1.89
MTHFRP42898 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.27□□□□□ -1.89
MTHFRP42898 AC008850.1-201ENST00000427546 362 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 SAR1AP4-201ENST00000429225 591 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.27□□□□□ -1.89
MTHFRP42898 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.27□□□□□ -1.89
MTHFRP42898 AL049734.2-201ENST00000441066 616 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.27□□□□□ -1.89
MTHFRP42898 AC125238.1-201ENST00000448842 249 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 AL590365.1-201ENST00000450788 243 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.27□□□□□ -1.89
MTHFRP42898 RPS29P12-201ENST00000460178 152 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.27□□□□□ -1.89
MTHFRP42898 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.27□□□□□ -1.89
MTHFRP42898 RNA5SP367-201ENST00000516557 118 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 SNORA64.4-201ENST00000516632 81 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 AP000857.1-201ENST00000532151 543 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 AC123904.2-201ENST00000548059 300 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.27□□□□□ -1.89
MTHFRP42898 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.27□□□□□ -1.89
MTHFRP42898 AL157394.1-201ENST00000562983 1224 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 AL356432.3-201ENST00000568952 465 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 AC005951.2-201ENST00000576282 495 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 AC078899.3-201ENST00000599065 212 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 AC012065.4-201ENST00000602445 679 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.27□□□□□ -1.89
MTHFRP42898 AP001981.2-201ENST00000603241 418 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 AL391813.2-201ENST00000609113 322 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 AC012360.2-201ENST00000609349 391 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 AC013412.1-201ENST00000610687 192 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 AC093838.1-201ENST00000613014 469 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 AL138713.1-201ENST00000624026 2130 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.27□□□□□ -1.89
MTHFRP42898 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MTHFRP42898 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MTHFRP42898 OR4G2P-202ENST00000641004 1759 ntBASIC3.27□□□□□ -1.89
MTHFRP42898 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MTHFRP42898 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MTHFRP42898 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
MTHFRP42898 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
MTHFRP42898 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
MTHFRP42898 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
MTHFRP42898 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
MTHFRP42898 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.26□□□□□ -1.89
MTHFRP42898 RNU4-21P-201ENST00000362802 126 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 SNORA54-201ENST00000384281 123 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
MTHFRP42898 RNA5SP293-201ENST00000410527 113 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 RPL17P12-201ENST00000413391 526 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.26□□□□□ -1.89
MTHFRP42898 RPL7P10-201ENST00000417407 739 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 AL139413.1-201ENST00000421309 217 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 AC018630.2-202ENST00000422992 927 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 AL390023.1-201ENST00000428836 262 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.26□□□□□ -1.89
MTHFRP42898 RPL32P28-201ENST00000443577 397 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 AC016696.1-201ENST00000446949 318 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.26□□□□□ -1.89
MTHFRP42898 RPL23AP41-201ENST00000484754 458 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 AC112204.1-201ENST00000502591 103 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
MTHFRP42898 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.26□□□□□ -1.89
MTHFRP42898 OR5G4P-201ENST00000525251 760 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 AP002748.2-201ENST00000528671 348 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 AC135279.1-201ENST00000543493 504 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
MTHFRP42898 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.26□□□□□ -1.89
MTHFRP42898 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.26□□□□□ -1.89
MTHFRP42898 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.26□□□□□ -1.89
MTHFRP42898 GLUD1P4-201ENST00000590914 418 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 RPL23AP78-201ENST00000599928 470 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 AC079089.3-201ENST00000603094 673 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 U73023.1-201ENST00000603134 700 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 AC108747.1-201ENST00000609508 535 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 AC009159.1-201ENST00000618386 642 ntBASIC3.26□□□□□ -1.89
MTHFRP42898 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.26□□□□□ -1.89
MTHFRP42898 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.26□□□□□ -1.89
MTHFRP42898 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.26□□□□□ -1.89
MTHFRP42898 AC004972.1-201ENST00000623934 2209 ntBASIC3.25□□□□□ -1.89
MTHFRP42898 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
MTHFRP42898 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
MTHFRP42898 AC009487.2-201ENST00000420969 6821 ntBASIC3.25□□□□□ -1.89
MTHFRP42898 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
MTHFRP42898 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.25□□□□□ -1.89
MTHFRP42898 MIR514A1-201ENST00000385133 98 ntBASIC3.25□□□□□ -1.89
MTHFRP42898 RNA5SP252-201ENST00000391131 119 ntBASIC3.25□□□□□ -1.89
MTHFRP42898 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
MTHFRP42898 AL109755.1-201ENST00000401791 649 ntBASIC3.25□□□□□ -1.89
MTHFRP42898 MIR1302-8-201ENST00000408342 128 ntBASIC3.25□□□□□ -1.89
MTHFRP42898 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.25□□□□□ -1.89
MTHFRP42898 USP9YP13-201ENST00000417797 480 ntBASIC3.25□□□□□ -1.89
MTHFRP42898 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.25□□□□□ -1.89
MTHFRP42898 CYCSP46-201ENST00000423569 204 ntBASIC3.25□□□□□ -1.89
MTHFRP42898 RPL7L1P10-201ENST00000427790 463 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms