Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.11□□□□□ -2.23
SNCAP37840 AC104108.1-201ENST00000509930 412 ntBASIC1.11□□□□□ -2.23
SNCAP37840 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.11□□□□□ -2.23
SNCAP37840 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.11□□□□□ -2.23
SNCAP37840 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.11□□□□□ -2.23
SNCAP37840 AC068338.1-201ENST00000565567 176 ntBASIC1.11□□□□□ -2.23
SNCAP37840 SEPT7P9-203ENST00000604116 343 ntBASIC1.11□□□□□ -2.23
SNCAP37840 AC013412.1-201ENST00000610687 192 ntBASIC1.11□□□□□ -2.23
SNCAP37840 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.11□□□□□ -2.23
SNCAP37840 AP002791.1-201ENST00000623291 381 ntBASIC1.11□□□□□ -2.23
SNCAP37840 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.11□□□□□ -2.23
SNCAP37840 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.11□□□□□ -2.23
SNCAP37840 LINC02211-204ENST00000642024 1070 ntBASIC1.11□□□□□ -2.23
SNCAP37840 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SNCAP37840 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
SNCAP37840 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SNCAP37840 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SNCAP37840 RNU6-730P-201ENST00000383954 104 ntBASIC1.1□□□□□ -2.23
SNCAP37840 RNU6-203P-201ENST00000384038 104 ntBASIC1.1□□□□□ -2.23
SNCAP37840 SNORA67.5-201ENST00000391036 107 ntBASIC1.1□□□□□ -2.23
SNCAP37840 MTND4LP20-201ENST00000402379 270 ntBASIC1.1□□□□□ -2.23
SNCAP37840 AC099548.1-201ENST00000421443 426 ntBASIC1.1□□□□□ -2.23
SNCAP37840 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.1□□□□□ -2.23
SNCAP37840 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.1□□□□□ -2.23
SNCAP37840 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SNCAP37840 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.1□□□□□ -2.23
SNCAP37840 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.1□□□□□ -2.23
SNCAP37840 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.1□□□□□ -2.23
SNCAP37840 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SNCAP37840 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.1□□□□□ -2.23
SNCAP37840 AP000873.5-201ENST00000533906 236 ntBASIC1.1□□□□□ -2.23
SNCAP37840 GNAI2P1-201ENST00000541815 315 ntBASIC1.1□□□□□ -2.23
SNCAP37840 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.1□□□□□ -2.23
SNCAP37840 PISRT1-201ENST00000626175 531 ntBASIC1.1□□□□□ -2.23
SNCAP37840 MIR7157-201ENST00000635801 60 ntBASIC1.1□□□□□ -2.23
SNCAP37840 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.1□□□□□ -2.23
SNCAP37840 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.23
SNCAP37840 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.09□□□□□ -2.23
SNCAP37840 AC016716.1-201ENST00000265882 708 ntBASIC1.09□□□□□ -2.23
SNCAP37840 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.09□□□□□ -2.23
SNCAP37840 SNORA8-201ENST00000384574 139 ntBASIC1.09□□□□□ -2.23
SNCAP37840 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
SNCAP37840 HMGN2P39-201ENST00000398005 273 ntBASIC1.09□□□□□ -2.23
SNCAP37840 EDDM3CP-201ENST00000415977 425 ntBASIC1.09□□□□□ -2.23
SNCAP37840 AL589880.1-201ENST00000448271 287 ntBASIC1.09□□□□□ -2.23
SNCAP37840 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.09□□□□□ -2.23
SNCAP37840 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.09□□□□□ -2.23
SNCAP37840 RPL31P58-201ENST00000469001 379 ntBASIC1.09□□□□□ -2.23
SNCAP37840 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.09□□□□□ -2.23
SNCAP37840 AC117522.2-201ENST00000510049 657 ntBASIC1.09□□□□□ -2.23
SNCAP37840 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.09□□□□□ -2.23
SNCAP37840 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.09□□□□□ -2.23
SNCAP37840 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.09□□□□□ -2.23
SNCAP37840 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.09□□□□□ -2.23
SNCAP37840 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.09□□□□□ -2.23
SNCAP37840 AC022254.1-201ENST00000567857 235 ntBASIC1.09□□□□□ -2.23
SNCAP37840 CBX3P2-202ENST00000583365 535 ntBASIC1.09□□□□□ -2.23
SNCAP37840 AC025588.3-201ENST00000604182 274 ntBASIC1.09□□□□□ -2.23
SNCAP37840 PRR13P7-201ENST00000605538 430 ntBASIC1.09□□□□□ -2.23
SNCAP37840 AC103810.8-201ENST00000607347 118 ntBASIC1.09□□□□□ -2.23
SNCAP37840 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.09□□□□□ -2.23
SNCAP37840 AC021755.4-201ENST00000616620 456 ntBASIC1.09□□□□□ -2.23
SNCAP37840 AC073968.1-201ENST00000618594 637 ntBASIC1.09□□□□□ -2.23
SNCAP37840 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.09□□□□□ -2.24
SNCAP37840 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.08□□□□□ -2.24
SNCAP37840 BTF3L4P2-201ENST00000392798 346 ntBASIC1.08□□□□□ -2.24
SNCAP37840 RNU2-41P-201ENST00000410991 178 ntBASIC1.08□□□□□ -2.24
SNCAP37840 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.08□□□□□ -2.24
SNCAP37840 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.08□□□□□ -2.24
SNCAP37840 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SNCAP37840 AL392003.1-201ENST00000434394 243 ntBASIC1.08□□□□□ -2.24
SNCAP37840 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.08□□□□□ -2.24
SNCAP37840 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.08□□□□□ -2.24
SNCAP37840 AL096803.2-201ENST00000450032 677 ntBASIC1.08□□□□□ -2.24
SNCAP37840 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.08□□□□□ -2.24
SNCAP37840 RNA5SP137-201ENST00000516833 135 ntBASIC1.08□□□□□ -2.24
SNCAP37840 RNU1-92P-201ENST00000517017 135 ntBASIC1.08□□□□□ -2.24
SNCAP37840 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.08□□□□□ -2.24
SNCAP37840 AC025857.1-201ENST00000525252 377 ntBASIC1.08□□□□□ -2.24
SNCAP37840 AC027807.1-201ENST00000559921 996 ntBASIC1.08□□□□□ -2.24
SNCAP37840 AC068620.4-201ENST00000636730 1182 ntBASIC1.08□□□□□ -2.24
SNCAP37840 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.08□□□□□ -2.24
SNCAP37840 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SNCAP37840 RNU6-1083P-201ENST00000384022 107 ntBASIC1.07□□□□□ -2.24
SNCAP37840 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SNCAP37840 BX276092.3-201ENST00000424182 230 ntBASIC1.07□□□□□ -2.24
SNCAP37840 RPL7P29-201ENST00000437151 728 ntBASIC1.07□□□□□ -2.24
SNCAP37840 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.07□□□□□ -2.24
SNCAP37840 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.07□□□□□ -2.24
SNCAP37840 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.07□□□□□ -2.24
SNCAP37840 SNORD13-201ENST00000459299 104 ntBASIC1.07□□□□□ -2.24
SNCAP37840 snoU13.15-201ENST00000459407 104 ntBASIC1.07□□□□□ -2.24
SNCAP37840 RPL31P60-201ENST00000478450 367 ntBASIC1.07□□□□□ -2.24
SNCAP37840 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.07□□□□□ -2.24
SNCAP37840 AC114801.2-201ENST00000503825 781 ntBASIC1.07□□□□□ -2.24
SNCAP37840 AC113398.2-201ENST00000507630 558 ntBASIC1.07□□□□□ -2.24
SNCAP37840 RPL23AP94-201ENST00000512518 302 ntBASIC1.07□□□□□ -2.24
SNCAP37840 RNA5SP165-201ENST00000517142 115 ntBASIC1.07□□□□□ -2.24
SNCAP37840 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.07□□□□□ -2.24
SNCAP37840 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms