Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXD13P35453 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD13P35453 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXD13P35453 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXD13P35453 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXD13P35453 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXD13P35453 AC093831.2-201ENST00000624393 3427 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 RNU6-1167P-201ENST00000363227 94 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 RPL21P3-201ENST00000395517 478 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.35□□□□□ -1.87
HOXD13P35453 SEPT2P1-201ENST00000419651 180 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXD13P35453 AC104651.1-201ENST00000427559 735 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXD13P35453 AC009969.1-201ENST00000438726 172 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXD13P35453 RNU7-23P-201ENST00000459465 62 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 AC146507.2-201ENST00000460608 476 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 MTCO2P29-201ENST00000465212 189 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXD13P35453 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXD13P35453 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXD13P35453 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXD13P35453 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.35□□□□□ -1.87
HOXD13P35453 MTCO3P24-201ENST00000572729 782 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 MIR3682-201ENST00000581338 84 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 AC012493.2-201ENST00000595083 291 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 DPPA3P3-201ENST00000603842 430 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 AL136363.1-201ENST00000605349 337 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 AC068276.1-201ENST00000605793 379 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 AC107294.1-201ENST00000609524 467 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 FTX_3.1-201ENST00000610451 147 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 MIR8057-201ENST00000620957 69 ntBASIC3.35□□□□□ -1.87
HOXD13P35453 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HOXD13P35453 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXD13P35453 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXD13P35453 AC008669.1-201ENST00000565823 2178 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 RNU1-105P-201ENST00000363470 161 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 SNORD46.1-201ENST00000364139 104 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 U3.19-201ENST00000390893 196 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 SNORA26.8-201ENST00000391306 124 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXD13P35453 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXD13P35453 CYCSP46-201ENST00000423569 204 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXD13P35453 TRIM60P18-201ENST00000441518 828 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 MTATP6P30-201ENST00000443540 664 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 COX6CP2-201ENST00000444980 225 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 RPL37P4-201ENST00000448908 268 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXD13P35453 snoU109.1-201ENST00000459339 135 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 RN7SL75P-201ENST00000461926 281 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 AC068724.1-201ENST00000487100 792 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 ARL4AP2-201ENST00000507378 601 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 Y_RNA.672-201ENST00000516289 104 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 AC245166.1-201ENST00000521012 253 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.34□□□□□ -1.87
HOXD13P35453 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXD13P35453 RPL21P5-201ENST00000554662 472 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXD13P35453 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXD13P35453 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXD13P35453 AC006504.3-201ENST00000586818 523 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXD13P35453 AL590229.1-201ENST00000603497 542 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 AC136601.2-201ENST00000604356 474 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 AP000860.1-201ENST00000605250 559 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXD13P35453 AL442067.2-201ENST00000614033 363 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXD13P35453 AL035425.3-201ENST00000564206 4996 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
HOXD13P35453 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
HOXD13P35453 AL359693.1-201ENST00000614959 2407 ntBASIC3.34□□□□□ -1.87
HOXD13P35453 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HOXD13P35453 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXD13P35453 AP003122.5-201ENST00000527668 3766 ntBASIC3.33□□□□□ -1.88
HOXD13P35453 MTND5P7-201ENST00000413558 1798 ntBASIC3.33□□□□□ -1.88
HOXD13P35453 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HOXD13P35453 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HOXD13P35453 RNU4-91P-201ENST00000364778 135 ntBASIC3.33□□□□□ -1.88
HOXD13P35453 SNORA70.4-201ENST00000365509 134 ntBASIC3.33□□□□□ -1.88
HOXD13P35453 RNU6-701P-201ENST00000384059 107 ntBASIC3.33□□□□□ -1.88
HOXD13P35453 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXD13P35453 NDUFB4P5-201ENST00000415445 361 ntBASIC3.33□□□□□ -1.88
HOXD13P35453 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXD13P35453 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXD13P35453 MTND1P26-201ENST00000440488 538 ntBASIC3.33□□□□□ -1.88
HOXD13P35453 NEFMP1-201ENST00000443423 1006 ntBASIC3.33□□□□□ -1.88
HOXD13P35453 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXD13P35453 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXD13P35453 RNU6-953P-201ENST00000459154 107 ntBASIC3.33□□□□□ -1.88
HOXD13P35453 AC117440.1-201ENST00000474107 571 ntBASIC3.33□□□□□ -1.88
HOXD13P35453 AC010587.1-201ENST00000505809 469 ntBASIC3.33□□□□□ -1.88
HOXD13P35453 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXD13P35453 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.33□□□□□ -1.88
HOXD13P35453 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXD13P35453 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
HOXD13P35453 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXD13P35453 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms