Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ZNF863P-201ENST00000426746 417 ntBASIC2.04□□□□□ -2.08
RPA3P35244 RPS15AP5-201ENST00000436276 388 ntBASIC2.04□□□□□ -2.08
RPA3P35244 RPL32P28-201ENST00000443577 397 ntBASIC2.04□□□□□ -2.08
RPA3P35244 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.04□□□□□ -2.08
RPA3P35244 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.04□□□□□ -2.08
RPA3P35244 TRGVB-201ENST00000453257 471 ntBASIC2.04□□□□□ -2.08
RPA3P35244 RPL12P25-201ENST00000455592 494 ntBASIC2.04□□□□□ -2.08
RPA3P35244 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.04□□□□□ -2.08
RPA3P35244 AC080128.1-201ENST00000474389 1917 ntBASIC2.04□□□□□ -2.08
RPA3P35244 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.04□□□□□ -2.08
RPA3P35244 RPL9P6-201ENST00000492764 598 ntBASIC2.04□□□□□ -2.08
RPA3P35244 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.04□□□□□ -2.08
RPA3P35244 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.04□□□□□ -2.08
RPA3P35244 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.04□□□□□ -2.08
RPA3P35244 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.04□□□□□ -2.08
RPA3P35244 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
RPA3P35244 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.04□□□□□ -2.08
RPA3P35244 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.04□□□□□ -2.08
RPA3P35244 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.04□□□□□ -2.08
RPA3P35244 MIR5708-201ENST00000579723 85 ntBASIC2.04□□□□□ -2.08
RPA3P35244 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.04□□□□□ -2.08
RPA3P35244 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
RPA3P35244 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.04□□□□□ -2.08
RPA3P35244 AC135507.1-201ENST00000607214 561 ntBASIC2.04□□□□□ -2.08
RPA3P35244 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.04□□□□□ -2.08
RPA3P35244 DUXAP9-208ENST00000622815 614 ntBASIC2.04□□□□□ -2.08
RPA3P35244 AL159972.1-201ENST00000625150 448 ntBASIC2.04□□□□□ -2.08
RPA3P35244 AC091948.2-201ENST00000636510 279 ntBASIC2.04□□□□□ -2.08
RPA3P35244 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
RPA3P35244 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
RPA3P35244 AC005539.1-201ENST00000443768 1479 ntBASIC2.03□□□□□ -2.08
RPA3P35244 AL356473.1-201ENST00000406203 1408 ntBASIC2.03□□□□□ -2.08
RPA3P35244 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RPA3P35244 RNU1-39P-201ENST00000383897 165 ntBASIC2.03□□□□□ -2.08
RPA3P35244 RNU6-140P-201ENST00000384566 108 ntBASIC2.03□□□□□ -2.08
RPA3P35244 SUMO2P12-201ENST00000405924 140 ntBASIC2.03□□□□□ -2.08
RPA3P35244 MTCO2P5-201ENST00000422621 426 ntBASIC2.03□□□□□ -2.08
RPA3P35244 AC027124.2-201ENST00000428249 105 ntBASIC2.03□□□□□ -2.08
RPA3P35244 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.03□□□□□ -2.08
RPA3P35244 USP12PX-201ENST00000432383 1057 ntBASIC2.03□□□□□ -2.08
RPA3P35244 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.03□□□□□ -2.08
RPA3P35244 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.03□□□□□ -2.08
RPA3P35244 OR10R1P-201ENST00000441524 1141 ntBASIC2.03□□□□□ -2.08
RPA3P35244 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.03□□□□□ -2.08
RPA3P35244 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.03□□□□□ -2.08
RPA3P35244 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.03□□□□□ -2.08
RPA3P35244 SCARNA11.3-201ENST00000517276 130 ntBASIC2.03□□□□□ -2.08
RPA3P35244 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.03□□□□□ -2.08
RPA3P35244 AGGF1P5-201ENST00000567900 919 ntBASIC2.03□□□□□ -2.08
RPA3P35244 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.03□□□□□ -2.08
RPA3P35244 MIR5694-201ENST00000581190 76 ntBASIC2.03□□□□□ -2.08
RPA3P35244 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.03□□□□□ -2.08
RPA3P35244 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.03□□□□□ -2.08
RPA3P35244 MIR3616-201ENST00000584070 92 ntBASIC2.03□□□□□ -2.08
RPA3P35244 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.03□□□□□ -2.08
RPA3P35244 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.03□□□□□ -2.08
RPA3P35244 VN1R87P-201ENST00000596706 487 ntBASIC2.03□□□□□ -2.08
RPA3P35244 VN1R78P-201ENST00000597393 564 ntBASIC2.03□□□□□ -2.08
RPA3P35244 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.03□□□□□ -2.08
RPA3P35244 AC243773.3-201ENST00000613270 256 ntBASIC2.03□□□□□ -2.08
RPA3P35244 AL512506.1-201ENST00000613918 449 ntBASIC2.03□□□□□ -2.08
RPA3P35244 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
RPA3P35244 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.03□□□□□ -2.08
RPA3P35244 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
RPA3P35244 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RPA3P35244 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
RPA3P35244 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.02□□□□□ -2.09
RPA3P35244 RNU6-884P-201ENST00000363889 107 ntBASIC2.02□□□□□ -2.09
RPA3P35244 Y_RNA.234-201ENST00000364409 97 ntBASIC2.02□□□□□ -2.09
RPA3P35244 SNORA64-201ENST00000384674 134 ntBASIC2.02□□□□□ -2.09
RPA3P35244 RNU6-220P-201ENST00000390919 107 ntBASIC2.02□□□□□ -2.09
RPA3P35244 AL079342.2-201ENST00000403367 482 ntBASIC2.02□□□□□ -2.09
RPA3P35244 AL139156.1-201ENST00000412785 841 ntBASIC2.02□□□□□ -2.09
RPA3P35244 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.02□□□□□ -2.09
RPA3P35244 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.02□□□□□ -2.09
RPA3P35244 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.02□□□□□ -2.09
RPA3P35244 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.02□□□□□ -2.09
RPA3P35244 AL139109.1-201ENST00000455491 297 ntBASIC2.02□□□□□ -2.09
RPA3P35244 RPS20P20-201ENST00000460498 340 ntBASIC2.02□□□□□ -2.09
RPA3P35244 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RPA3P35244 RNU6-840P-201ENST00000517275 65 ntBASIC2.02□□□□□ -2.09
RPA3P35244 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.02□□□□□ -2.09
RPA3P35244 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.02□□□□□ -2.09
RPA3P35244 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.02□□□□□ -2.09
RPA3P35244 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.02□□□□□ -2.09
RPA3P35244 AC135628.1-201ENST00000568867 534 ntBASIC2.02□□□□□ -2.09
RPA3P35244 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.02□□□□□ -2.09
RPA3P35244 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.02□□□□□ -2.09
RPA3P35244 FTX_3.1-201ENST00000610451 147 ntBASIC2.02□□□□□ -2.09
RPA3P35244 AC005332.10-201ENST00000612725 619 ntBASIC2.02□□□□□ -2.09
RPA3P35244 MTND1P37-201ENST00000636562 264 ntBASIC2.02□□□□□ -2.09
RPA3P35244 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
RPA3P35244 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
RPA3P35244 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.01□□□□□ -2.09
RPA3P35244 MTND4P27-201ENST00000450813 1354 ntBASIC2.01□□□□□ -2.09
RPA3P35244 MTND4P35-201ENST00000604257 1375 ntBASIC2.01□□□□□ -2.09
RPA3P35244 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
RPA3P35244 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPA3P35244 SNORA38-201ENST00000363946 132 ntBASIC2.01□□□□□ -2.09
RPA3P35244 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms