Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.11□□□□□ -1.59
GPC1P35052 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GPC1P35052 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.11□□□□□ -1.59
GPC1P35052 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
GPC1P35052 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC1P35052 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
GPC1P35052 AC104260.2-201ENST00000623551 3497 ntBASIC5.1□□□□□ -1.59
GPC1P35052 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC1P35052 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.1□□□□□ -1.59
GPC1P35052 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC1P35052 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.1□□□□□ -1.59
GPC1P35052 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC1P35052 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC1P35052 SNORD14B-201ENST00000364533 90 ntBASIC5.1□□□□□ -1.59
GPC1P35052 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC1P35052 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.1□□□□□ -1.59
GPC1P35052 RNU6-843P-201ENST00000384454 104 ntBASIC5.1□□□□□ -1.59
GPC1P35052 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
GPC1P35052 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.1□□□□□ -1.59
GPC1P35052 SDAD1P2-201ENST00000441308 2028 ntBASIC5.1□□□□□ -1.59
GPC1P35052 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.1□□□□□ -1.59
GPC1P35052 snoU13.30-201ENST00000458951 104 ntBASIC5.1□□□□□ -1.59
GPC1P35052 AC087588.1-201ENST00000462203 316 ntBASIC5.1□□□□□ -1.59
GPC1P35052 RPS4XP1-201ENST00000482189 787 ntBASIC5.1□□□□□ -1.59
GPC1P35052 AP001025.1-201ENST00000486139 332 ntBASIC5.1□□□□□ -1.59
GPC1P35052 RPL30P1-201ENST00000488676 339 ntBASIC5.1□□□□□ -1.59
GPC1P35052 OR7H2P-201ENST00000513483 306 ntBASIC5.1□□□□□ -1.59
GPC1P35052 SCARNA20.4-201ENST00000516969 131 ntBASIC5.1□□□□□ -1.59
GPC1P35052 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.1□□□□□ -1.59
GPC1P35052 AC107918.3-201ENST00000533272 382 ntBASIC5.1□□□□□ -1.59
GPC1P35052 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.1□□□□□ -1.59
GPC1P35052 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.1□□□□□ -1.59
GPC1P35052 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC1P35052 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC1P35052 MIR4282-201ENST00000583613 67 ntBASIC5.1□□□□□ -1.59
GPC1P35052 AC008521.2-201ENST00000591021 259 ntBASIC5.1□□□□□ -1.59
GPC1P35052 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.1□□□□□ -1.59
GPC1P35052 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC1P35052 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
GPC1P35052 AC135776.4-201ENST00000624300 1904 ntBASIC5.1□□□□□ -1.59
GPC1P35052 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC1P35052 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
GPC1P35052 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC1P35052 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC1P35052 AL451142.2-201ENST00000429076 2090 ntBASIC5.09□□□□□ -1.59
GPC1P35052 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.09□□□□□ -1.59
GPC1P35052 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.09□□□□□ -1.59
GPC1P35052 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
GPC1P35052 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GPC1P35052 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.09□□□□□ -1.59
GPC1P35052 RNU5A-1-201ENST00000362698 116 ntBASIC5.09□□□□□ -1.59
GPC1P35052 RNU1-19P-201ENST00000363306 165 ntBASIC5.09□□□□□ -1.59
GPC1P35052 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GPC1P35052 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GPC1P35052 RNU6-1289P-201ENST00000384431 106 ntBASIC5.09□□□□□ -1.59
GPC1P35052 RNU6-146P-201ENST00000384602 108 ntBASIC5.09□□□□□ -1.59
GPC1P35052 HSPA8P15-201ENST00000401676 786 ntBASIC5.09□□□□□ -1.59
GPC1P35052 BMS1P17-202ENST00000416720 316 ntBASIC5.09□□□□□ -1.59
GPC1P35052 GSTM5P1-201ENST00000434751 660 ntBASIC5.09□□□□□ -1.59
GPC1P35052 AC016700.2-201ENST00000446011 156 ntBASIC5.09□□□□□ -1.59
GPC1P35052 AC140059.1-201ENST00000489238 361 ntBASIC5.09□□□□□ -1.59
GPC1P35052 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.09□□□□□ -1.59
GPC1P35052 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.09□□□□□ -1.59
GPC1P35052 RNU6-377P-201ENST00000515965 102 ntBASIC5.09□□□□□ -1.59
GPC1P35052 RNU6-941P-201ENST00000516346 108 ntBASIC5.09□□□□□ -1.59
GPC1P35052 RN7SKP234-201ENST00000517173 224 ntBASIC5.09□□□□□ -1.59
GPC1P35052 AC008694.2-201ENST00000517591 306 ntBASIC5.09□□□□□ -1.59
GPC1P35052 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.09□□□□□ -1.59
GPC1P35052 AC005476.1-201ENST00000554427 397 ntBASIC5.09□□□□□ -1.59
GPC1P35052 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.09□□□□□ -1.59
GPC1P35052 RN7SL290P-201ENST00000578661 300 ntBASIC5.09□□□□□ -1.59
GPC1P35052 AC060766.3-201ENST00000591442 263 ntBASIC5.09□□□□□ -1.59
GPC1P35052 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.09□□□□□ -1.59
GPC1P35052 AC244107.2-201ENST00000611773 76 ntBASIC5.09□□□□□ -1.59
GPC1P35052 AC109583.2-201ENST00000617367 129 ntBASIC5.09□□□□□ -1.59
GPC1P35052 MIR6729-201ENST00000618194 65 ntBASIC5.09□□□□□ -1.59
GPC1P35052 AL360181.4-201ENST00000621752 134 ntBASIC5.09□□□□□ -1.59
GPC1P35052 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.09□□□□□ -1.59
GPC1P35052 CU639417.4-201ENST00000623928 207 ntBASIC5.09□□□□□ -1.59
GPC1P35052 MTND1P7-201ENST00000632801 297 ntBASIC5.09□□□□□ -1.59
GPC1P35052 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GPC1P35052 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.09□□□□□ -1.59
GPC1P35052 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
GPC1P35052 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
GPC1P35052 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GPC1P35052 AL731532.2-201ENST00000623542 1953 ntBASIC5.09□□□□□ -1.6
GPC1P35052 AL450345.1-202ENST00000605741 3881 ntBASIC5.09□□□□□ -1.6
GPC1P35052 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.09□□□□□ -1.6
GPC1P35052 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
GPC1P35052 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
GPC1P35052 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
GPC1P35052 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
GPC1P35052 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GPC1P35052 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.08□□□□□ -1.6
GPC1P35052 AC073136.1-201ENST00000449426 2884 ntBASIC5.08□□□□□ -1.6
GPC1P35052 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
GPC1P35052 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.08□□□□□ -1.6
GPC1P35052 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GPC1P35052 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
GPC1P35052 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms