Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
HOXC13P31276 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC13P31276 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXC13P31276 MIR548S-201ENST00000581352 82 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 AC090616.2-202ENST00000584248 222 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC13P31276 AC073544.2-201ENST00000601155 540 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 uc_338.1-201ENST00000612113 180 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC13P31276 AC073308.1-201ENST00000623696 305 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC13P31276 CR848007.1-201ENST00000442354 1699 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
HOXC13P31276 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC13P31276 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXC13P31276 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC13P31276 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC13P31276 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC13P31276 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
HOXC13P31276 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HOXC13P31276 MIR422A-201ENST00000362286 90 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 RNU6-931P-201ENST00000363850 107 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
HOXC13P31276 RN7SKP285-201ENST00000410137 318 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 TPMTP3-201ENST00000411928 735 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 MTND1P21-201ENST00000412991 285 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC13P31276 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC13P31276 PPP1R11P2-201ENST00000423543 382 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 AC012498.1-201ENST00000424037 437 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 MTCO2P19-201ENST00000427513 598 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC13P31276 AL596276.1-201ENST00000434465 418 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 TAAR7P-201ENST00000436141 242 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXC13P31276 LSM1P1-201ENST00000438629 273 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 UBE2V1P7-201ENST00000446395 340 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 AC004801.2-202ENST00000463559 283 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 RN7SL429P-201ENST00000479090 223 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 RN7SL489P-201ENST00000486185 223 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 RN7SL327P-201ENST00000488659 223 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 AC034222.1-201ENST00000494052 532 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXC13P31276 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC13P31276 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC13P31276 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC13P31276 MIR4672-201ENST00000583126 81 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 AC020895.1-201ENST00000595362 272 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 AC019159.1-201ENST00000605094 187 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 AC091965.4-201ENST00000607691 587 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 AC138749.5-201ENST00000611461 208 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 AC100793.4-201ENST00000613683 429 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 RN7SL853P-201ENST00000617250 223 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 AC009268.2-201ENST00000621925 457 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 AC073476.4-201ENST00000628409 72 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC13P31276 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC13P31276 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC13P31276 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HOXC13P31276 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC13P31276 GABRG2-229ENST00000641017 3628 ntBASIC3.38□□□□□ -1.87
HOXC13P31276 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXC13P31276 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXC13P31276 RNU1-75P-201ENST00000347264 129 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 RNU6-723P-201ENST00000383973 107 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 Y_RNA.560-201ENST00000384689 102 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 RNU6-114P-201ENST00000384704 105 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXC13P31276 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.37□□□□□ -1.87
HOXC13P31276 CDK8P2-201ENST00000415020 547 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 SPA17P1-201ENST00000416656 452 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 MTCO2P34-201ENST00000421994 607 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 AC244035.1-201ENST00000430042 390 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXC13P31276 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC13P31276 AL121601.2-201ENST00000438019 707 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 HMGB3P11-201ENST00000440127 604 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 RBMX2P4-201ENST00000441256 376 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 Z96811.1-201ENST00000445880 108 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 Z99127.3-201ENST00000448158 395 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 LINC00888-204ENST00000487386 421 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.37□□□□□ -1.87
HOXC13P31276 AC147055.4-201ENST00000504399 745 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.37□□□□□ -1.87
HOXC13P31276 RAC1P5-201ENST00000512182 576 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 AC091965.2-201ENST00000512324 613 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 AC022447.1-201ENST00000515358 464 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 SCARNA15.2-201ENST00000516409 127 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 Y_RNA.695-201ENST00000516715 107 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 SNORA31.22-201ENST00000517204 135 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 SCARNA20.6-201ENST00000517251 106 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 AC022080.3-201ENST00000544433 482 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXC13P31276 AC124947.2-202ENST00000552735 133 ntBASIC3.37□□□□□ -1.87
HOXC13P31276 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC13P31276 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC13P31276 EIF1P4-201ENST00000572664 335 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms