Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.03□□□□□ -1.76
COL11A2P13942 AC098848.2-201ENST00000588023 330 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 AC006006.1-201ENST00000603082 144 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.03□□□□□ -1.76
COL11A2P13942 AL513302.2-201ENST00000562313 1842 ntBASIC4.03□□□□□ -1.76
COL11A2P13942 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.03□□□□□ -1.76
COL11A2P13942 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.03□□□□□ -1.76
COL11A2P13942 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.03□□□□□ -1.76
COL11A2P13942 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
COL11A2P13942 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.03□□□□□ -1.76
COL11A2P13942 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.03□□□□□ -1.76
COL11A2P13942 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL11A2P13942 AC083843.2-201ENST00000568248 6253 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 AC139713.2-215ENST00000641428 5037 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.02□□□□□ -1.77
COL11A2P13942 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.02□□□□□ -1.77
COL11A2P13942 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.02□□□□□ -1.77
COL11A2P13942 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL11A2P13942 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL11A2P13942 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.02□□□□□ -1.77
COL11A2P13942 AC068647.1-201ENST00000489539 2265 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL11A2P13942 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
COL11A2P13942 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
COL11A2P13942 RNU6-249P-201ENST00000363016 102 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL11A2P13942 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
COL11A2P13942 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.02□□□□□ -1.77
COL11A2P13942 AC009161.1-201ENST00000417306 376 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 AC108059.2-201ENST00000434626 151 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 AF228730.2-201ENST00000438784 848 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.02□□□□□ -1.77
COL11A2P13942 RPS20P32-201ENST00000456044 356 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.02□□□□□ -1.77
COL11A2P13942 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.02□□□□□ -1.77
COL11A2P13942 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.02□□□□□ -1.77
COL11A2P13942 KLHL2P1-201ENST00000508691 521 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.02□□□□□ -1.77
COL11A2P13942 BTF3P12-201ENST00000519620 469 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.02□□□□□ -1.77
COL11A2P13942 ZNF705CP-201ENST00000530515 889 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 AC022080.3-201ENST00000544433 482 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 BNIP3P6-201ENST00000549284 499 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 AL360157.1-201ENST00000565962 87 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 UBL5P2-201ENST00000583788 219 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL11A2P13942 AC124312.5-201ENST00000604451 268 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 IGHV3-29-201ENST00000604817 344 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 AC019193.3-201ENST00000609144 554 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 AL132822.1-201ENST00000617063 513 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 uc_338.9-201ENST00000617424 182 ntBASIC4.02□□□□□ -1.77
COL11A2P13942 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
COL11A2P13942 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.02□□□□□ -1.77
COL11A2P13942 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL11A2P13942 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
COL11A2P13942 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL11A2P13942 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.02□□□□□ -1.77
COL11A2P13942 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL11A2P13942 LINC02471-203ENST00000641941 4752 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A2P13942 NACAP2-201ENST00000318548 624 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 RNU6-7-201ENST00000364784 107 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 RNU6-996P-201ENST00000365438 107 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 RNU6-8-201ENST00000365467 107 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 Y_RNA.445-201ENST00000384168 102 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 SNORD116-29-201ENST00000384516 83 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A2P13942 DHFRP6-201ENST00000401776 268 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 HSPE1P8-201ENST00000406997 288 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 RNU6-1148P-201ENST00000410992 104 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 AL645937.1-202ENST00000421799 937 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 SRIP2-201ENST00000428470 166 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.01□□□□□ -1.77
COL11A2P13942 CACYBPP2-201ENST00000453625 678 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 MTCO2P29-201ENST00000465212 189 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 AC078785.3-201ENST00000476607 425 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.01□□□□□ -1.77
COL11A2P13942 AC022616.3-201ENST00000523940 148 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.01□□□□□ -1.77
COL11A2P13942 AC016925.2-201ENST00000605108 242 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 AL080274.1-201ENST00000605565 220 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 AL355816.1-201ENST00000607951 118 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 AC004908.2-201ENST00000609090 574 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A2P13942 RIOK3P1-201ENST00000418778 1528 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A2P13942 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
COL11A2P13942 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A2P13942 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.01□□□□□ -1.77
COL11A2P13942 OR4G1P-203ENST00000641984 1631 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
COL11A2P13942 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A2P13942 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
COL11A2P13942 Y_RNA.202-201ENST00000364083 110 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 MIR137-201ENST00000385223 102 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 SNORD67-201ENST00000390833 111 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL11A2P13942 AC119618.1-201ENST00000434191 222 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms