Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNA5SP148-201ENST00000516527 94 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 RNU6-885P-201ENST00000516607 104 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 RN7SKP283-201ENST00000517197 270 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.11□□□□□ -1.91
COL2A1P02458 OR6C73P-201ENST00000546432 358 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 AC015712.3-201ENST00000559380 164 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 VN1R79P-201ENST00000593540 513 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 AC055876.5-201ENST00000605667 259 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 AC005046.1-201ENST00000608515 625 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 AC112204.3-201ENST00000623822 332 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 AC110994.2-201ENST00000635481 492 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 AC024614.3-201ENST00000637860 256 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL2A1P02458 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
COL2A1P02458 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 AC245100.2-201ENST00000454544 1679 ntBASIC3.11□□□□□ -1.91
COL2A1P02458 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.1□□□□□ -1.91
COL2A1P02458 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL2A1P02458 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.1□□□□□ -1.91
COL2A1P02458 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
COL2A1P02458 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL2A1P02458 RNU6-723P-201ENST00000383973 107 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 MIR518C-201ENST00000384822 101 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 RNU2-41P-201ENST00000410991 178 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 AL359704.1-201ENST00000411586 781 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 EEF1A1P40-201ENST00000412883 573 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 AL136133.1-201ENST00000413694 376 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.1□□□□□ -1.91
COL2A1P02458 PSPHP1-201ENST00000450062 261 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 MTCO3P11-201ENST00000455103 774 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 SNORD42A-201ENST00000459584 64 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.1□□□□□ -1.91
COL2A1P02458 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.1□□□□□ -1.91
COL2A1P02458 SNORA18.6-201ENST00000516792 115 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.1□□□□□ -1.91
COL2A1P02458 OR5AQ1P-201ENST00000527596 927 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.1□□□□□ -1.91
COL2A1P02458 MIR4666A-201ENST00000580160 79 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 AC010200.2-201ENST00000605098 235 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.1□□□□□ -1.91
COL2A1P02458 AC064836.2-201ENST00000609491 462 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 AL356274.1-201ENST00000617064 410 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 CTSLP2-204ENST00000629029 392 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 ZNF37BP-203ENST00000452306 1352 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL2A1P02458 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL2A1P02458 OR4G11P-202ENST00000642116 1414 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.1□□□□□ -1.91
COL2A1P02458 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.1□□□□□ -1.91
COL2A1P02458 MTND5P19-201ENST00000424872 1794 ntBASIC3.1□□□□□ -1.91
COL2A1P02458 CBX3P1-201ENST00000325243 554 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 SNORD62.1-201ENST00000362541 86 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 RNY4P34-201ENST00000364779 95 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 RNU1-100P-201ENST00000365255 165 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 Y_RNA.381-201ENST00000365666 102 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 Y_RNA.529-201ENST00000384586 119 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 RNU6-1009P-201ENST00000390996 107 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 MTCO3P40-201ENST00000392516 676 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 AL356057.2-201ENST00000403318 432 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 RNU6-248P-201ENST00000410720 107 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 RPL17P12-201ENST00000413391 526 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 HMGB1P11-201ENST00000413899 637 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 AC009963.1-201ENST00000417265 157 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 RPS27AP14-201ENST00000422868 454 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 MTCO1P20-201ENST00000425366 358 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 AL031736.2-201ENST00000426573 787 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 AC008850.1-201ENST00000427546 362 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.09□□□□□ -1.91
COL2A1P02458 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.09□□□□□ -1.91
COL2A1P02458 FCF1P1-201ENST00000432690 571 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 AC000111.3-201ENST00000433478 193 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.09□□□□□ -1.91
COL2A1P02458 RPL23AP15-201ENST00000450202 459 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.09□□□□□ -1.91
COL2A1P02458 SNRPGP5-201ENST00000456003 220 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 RNU7-170P-201ENST00000459303 61 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 LARP1BP2-201ENST00000486594 519 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 AC132942.1-201ENST00000486753 483 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 SNX5P1-201ENST00000505757 1041 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.09□□□□□ -1.91
COL2A1P02458 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.09□□□□□ -1.91
COL2A1P02458 LRRC34P2-201ENST00000514850 553 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 Y_RNA.675-201ENST00000516389 149 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 RNU6-1004P-201ENST00000516584 111 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.09□□□□□ -1.91
COL2A1P02458 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.09□□□□□ -1.91
COL2A1P02458 FAM92A1P1-201ENST00000528023 890 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.09□□□□□ -1.91
COL2A1P02458 AL138976.2-201ENST00000563989 694 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 AC091489.2-201ENST00000566263 604 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.09□□□□□ -1.91
COL2A1P02458 BNIP3P8-201ENST00000597863 560 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.09□□□□□ -1.91
COL2A1P02458 AC093591.3-201ENST00000634516 308 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 LRRC77P-213ENST00000637727 880 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 CRYM-AS1-204ENST00000637983 556 ntBASIC3.09□□□□□ -1.91
COL2A1P02458 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.09□□□□□ -1.91
COL2A1P02458 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms