Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.34□□□□□ -1.87
LDLRP01130 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.34□□□□□ -1.87
LDLRP01130 HMGN1P18-201ENST00000457642 277 ntBASIC3.34□□□□□ -1.87
LDLRP01130 snoU13.4-201ENST00000458916 104 ntBASIC3.34□□□□□ -1.87
LDLRP01130 AC021205.2-201ENST00000480069 347 ntBASIC3.34□□□□□ -1.87
LDLRP01130 RPL7P23-201ENST00000493874 747 ntBASIC3.34□□□□□ -1.87
LDLRP01130 AC026801.2-201ENST00000515352 425 ntBASIC3.34□□□□□ -1.87
LDLRP01130 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.34□□□□□ -1.87
LDLRP01130 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.34□□□□□ -1.87
LDLRP01130 SNORA70.19-201ENST00000516717 90 ntBASIC3.34□□□□□ -1.87
LDLRP01130 Y_RNA.702-201ENST00000516843 96 ntBASIC3.34□□□□□ -1.87
LDLRP01130 MIR2276-201ENST00000516886 89 ntBASIC3.34□□□□□ -1.87
LDLRP01130 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
LDLRP01130 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.34□□□□□ -1.87
LDLRP01130 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.34□□□□□ -1.87
LDLRP01130 AC022616.6-201ENST00000520479 119 ntBASIC3.34□□□□□ -1.87
LDLRP01130 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.34□□□□□ -1.87
LDLRP01130 IGHV3-76-201ENST00000522465 295 ntBASIC3.34□□□□□ -1.87
LDLRP01130 AP003181.2-201ENST00000528941 181 ntBASIC3.34□□□□□ -1.87
LDLRP01130 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.34□□□□□ -1.87
LDLRP01130 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.34□□□□□ -1.87
LDLRP01130 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.34□□□□□ -1.87
LDLRP01130 AC009977.1-201ENST00000586015 570 ntBASIC3.34□□□□□ -1.87
LDLRP01130 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.34□□□□□ -1.87
LDLRP01130 C8orf59P2-201ENST00000603441 271 ntBASIC3.34□□□□□ -1.87
LDLRP01130 AL137843.1-201ENST00000605078 385 ntBASIC3.34□□□□□ -1.87
LDLRP01130 AP000860.1-201ENST00000605250 559 ntBASIC3.34□□□□□ -1.87
LDLRP01130 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.34□□□□□ -1.87
LDLRP01130 AL450472.3-201ENST00000615578 367 ntBASIC3.34□□□□□ -1.87
LDLRP01130 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
LDLRP01130 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
LDLRP01130 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.34□□□□□ -1.88
LDLRP01130 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.34□□□□□ -1.88
LDLRP01130 AC092326.2-201ENST00000624772 1561 ntBASIC3.34□□□□□ -1.88
LDLRP01130 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LDLRP01130 AC118273.1-201ENST00000525324 3006 ntBASIC3.33□□□□□ -1.88
LDLRP01130 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LDLRP01130 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LDLRP01130 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
LDLRP01130 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LDLRP01130 RNU6-637P-201ENST00000384050 107 ntBASIC3.33□□□□□ -1.88
LDLRP01130 RNU5A-6P-201ENST00000384136 116 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.33□□□□□ -1.88
LDLRP01130 SPA17P1-201ENST00000416656 452 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AC245291.1-201ENST00000419501 328 ntBASIC3.33□□□□□ -1.88
LDLRP01130 MTCO1P39-201ENST00000426148 480 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.33□□□□□ -1.88
LDLRP01130 AL121871.1-201ENST00000443413 436 ntBASIC3.33□□□□□ -1.88
LDLRP01130 RPL17P49-201ENST00000443728 411 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AC125238.1-201ENST00000448842 249 ntBASIC3.33□□□□□ -1.88
LDLRP01130 MTND1P9-201ENST00000453775 944 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AL033528.1-201ENST00000453780 140 ntBASIC3.33□□□□□ -1.88
LDLRP01130 SNRPFP4-201ENST00000456366 242 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AC013267.1-201ENST00000458227 267 ntBASIC3.33□□□□□ -1.88
LDLRP01130 RPL21P10-201ENST00000463521 490 ntBASIC3.33□□□□□ -1.88
LDLRP01130 RPS3AP17-201ENST00000472594 777 ntBASIC3.33□□□□□ -1.88
LDLRP01130 NDUFB4P2-201ENST00000509515 391 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.33□□□□□ -1.88
LDLRP01130 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.33□□□□□ -1.88
LDLRP01130 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
LDLRP01130 RNU6-201P-201ENST00000517100 61 ntBASIC3.33□□□□□ -1.88
LDLRP01130 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.33□□□□□ -1.88
LDLRP01130 SNRPGP16-201ENST00000533275 226 ntBASIC3.33□□□□□ -1.88
LDLRP01130 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.33□□□□□ -1.88
LDLRP01130 RPL21P5-201ENST00000554662 472 ntBASIC3.33□□□□□ -1.88
LDLRP01130 OR4T1P-201ENST00000554933 911 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.33□□□□□ -1.88
LDLRP01130 AL356432.3-201ENST00000568952 465 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AC137800.2-201ENST00000574375 120 ntBASIC3.33□□□□□ -1.88
LDLRP01130 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.33□□□□□ -1.88
LDLRP01130 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.33□□□□□ -1.88
LDLRP01130 AP000907.4-201ENST00000604143 237 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AL359999.1-201ENST00000604513 294 ntBASIC3.33□□□□□ -1.88
LDLRP01130 YPEL5P2-201ENST00000605553 359 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AC009994.1-201ENST00000606889 253 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AP001330.5-201ENST00000607176 411 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AC099778.2-201ENST00000610904 211 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AC091304.9-201ENST00000612091 226 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AC135507.2-201ENST00000612443 309 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AC138649.3-201ENST00000622154 254 ntBASIC3.33□□□□□ -1.88
LDLRP01130 AC124864.2-201ENST00000624736 186 ntBASIC3.33□□□□□ -1.88
LDLRP01130 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
LDLRP01130 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LDLRP01130 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
LDLRP01130 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LDLRP01130 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LDLRP01130 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LDLRP01130 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LDLRP01130 RPL7P26-201ENST00000333817 754 ntBASIC3.32□□□□□ -1.88
LDLRP01130 RNU6-432P-201ENST00000384196 109 ntBASIC3.32□□□□□ -1.88
LDLRP01130 Y_RNA.450-201ENST00000384198 113 ntBASIC3.32□□□□□ -1.88
LDLRP01130 SNORD115.1-201ENST00000391109 76 ntBASIC3.32□□□□□ -1.88
LDLRP01130 SNORA48.5-201ENST00000391143 135 ntBASIC3.32□□□□□ -1.88
LDLRP01130 MIR1289-1-201ENST00000408836 144 ntBASIC3.32□□□□□ -1.88
LDLRP01130 RNA5SP129-201ENST00000410276 118 ntBASIC3.32□□□□□ -1.88
LDLRP01130 RNA5SP293-201ENST00000410527 113 ntBASIC3.32□□□□□ -1.88
LDLRP01130 RNU2-41P-201ENST00000410991 178 ntBASIC3.32□□□□□ -1.88
LDLRP01130 HMGN1P24-201ENST00000412282 298 ntBASIC3.32□□□□□ -1.88
LDLRP01130 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.32□□□□□ -1.88
LDLRP01130 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms