Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC078883.4-201ENST00000623218 367 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 AL691447.3-201ENST00000635020 330 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 AC097655.1-201ENST00000635075 318 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 AC110079.1-202ENST00000635213 138 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.96□□□□□ -1.94
PDGFBP01127 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.96□□□□□ -1.94
PDGFBP01127 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
PDGFBP01127 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PDGFBP01127 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PDGFBP01127 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PDGFBP01127 RNA5SP68-201ENST00000363885 119 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 RNU1-112P-201ENST00000364401 164 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.95□□□□□ -1.94
PDGFBP01127 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.95□□□□□ -1.94
PDGFBP01127 MIR325-201ENST00000385260 98 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 MIR764-201ENST00000390811 85 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 RNU6-754P-201ENST00000391166 107 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 RNA5SP354-201ENST00000391247 136 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 CCNG1P1-201ENST00000406783 885 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 MTND2P18-201ENST00000419962 1030 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 AL390023.1-201ENST00000428836 262 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 UBE2D3P4-201ENST00000441973 436 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 WASF1P1-201ENST00000447560 1131 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.95□□□□□ -1.94
PDGFBP01127 Z99127.3-201ENST00000448158 395 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 RPS3P1-201ENST00000456781 192 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.95□□□□□ -1.94
PDGFBP01127 RNU7-23P-201ENST00000459465 62 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 MTCO2P6-201ENST00000463134 685 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.95□□□□□ -1.94
PDGFBP01127 AC009901.1-201ENST00000506703 541 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 AC087373.1-201ENST00000524920 491 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 ATP5F1P5-201ENST00000526403 760 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.95□□□□□ -1.94
PDGFBP01127 AP004247.1-201ENST00000531556 1289 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PDGFBP01127 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.95□□□□□ -1.94
PDGFBP01127 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.95□□□□□ -1.94
PDGFBP01127 AC007954.1-201ENST00000554198 494 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.95□□□□□ -1.94
PDGFBP01127 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.95□□□□□ -1.94
PDGFBP01127 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.95□□□□□ -1.94
PDGFBP01127 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.95□□□□□ -1.94
PDGFBP01127 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.95□□□□□ -1.94
PDGFBP01127 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.95□□□□□ -1.94
PDGFBP01127 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.95□□□□□ -1.94
PDGFBP01127 AC020895.1-201ENST00000595362 272 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 MTCYBP22-201ENST00000603788 447 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 AL161729.4-201ENST00000604650 476 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 AL360219.1-201ENST00000610230 366 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 MIR6817-201ENST00000615588 66 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 AC002064.3-201ENST00000623448 346 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 AC112204.3-201ENST00000623822 332 ntBASIC2.95□□□□□ -1.94
PDGFBP01127 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.95□□□□□ -1.94
PDGFBP01127 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PDGFBP01127 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
PDGFBP01127 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PDGFBP01127 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PDGFBP01127 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.95□□□□□ -1.94
PDGFBP01127 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.94□□□□□ -1.94
PDGFBP01127 MTND5P27-201ENST00000428871 1720 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 RNU6-859P-201ENST00000362728 107 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 SNORA23-201ENST00000365128 182 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 U3.20-201ENST00000390909 217 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 RNU6-920P-201ENST00000410926 92 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.94□□□□□ -1.94
PDGFBP01127 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.94□□□□□ -1.94
PDGFBP01127 MTND4P20-201ENST00000424125 869 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 AC104332.2-201ENST00000429959 156 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 RPS6P15-201ENST00000431996 751 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.94□□□□□ -1.94
PDGFBP01127 LARP1BP3-201ENST00000437229 869 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 HMGB3P11-201ENST00000440127 604 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 RPS26P21-201ENST00000475397 348 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 AL135752.1-201ENST00000479477 471 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.94□□□□□ -1.94
PDGFBP01127 RPF2P2-201ENST00000504693 896 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.94□□□□□ -1.94
PDGFBP01127 ARL4AP2-201ENST00000507378 601 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 POU5F1P7-201ENST00000508759 541 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.94□□□□□ -1.94
PDGFBP01127 RNA5SP148-201ENST00000516527 94 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 RNU6-928P-201ENST00000516876 104 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.94□□□□□ -1.94
PDGFBP01127 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.94□□□□□ -1.94
PDGFBP01127 OSBPL9P5-201ENST00000542581 171 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PDGFBP01127 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 TRAV28-201ENST00000557548 323 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 AC027176.1-201ENST00000560204 514 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.94□□□□□ -1.94
PDGFBP01127 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.94□□□□□ -1.94
PDGFBP01127 AC122133.1-201ENST00000613964 233 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.94□□□□□ -1.94
PDGFBP01127 PCMTD1P7-201ENST00000634506 357 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.94□□□□□ -1.94
PDGFBP01127 AC099063.3-201ENST00000642066 185 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms