Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 SCARNA17.2-201ENST00000516334 143 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.33□□□□□ -2.2
SNRNP200O75643 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.33□□□□□ -2.2
SNRNP200O75643 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.33□□□□□ -2.2
SNRNP200O75643 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.33□□□□□ -2.2
SNRNP200O75643 AC074051.3-201ENST00000570238 358 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 MIR4529-201ENST00000578110 78 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 AC008749.1-201ENST00000597650 306 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 AC007038.2-201ENST00000608095 740 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 SCARNA17.4-201ENST00000614296 143 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 MTCO1P9-201ENST00000505577 1534 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.33□□□□□ -2.2
SNRNP200O75643 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SNRNP200O75643 RNU6-619P-201ENST00000365146 108 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.33□□□□□ -2.2
SNRNP200O75643 DSTNP4-201ENST00000399472 474 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 POLHP1-201ENST00000411806 470 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 RPS15AP38-201ENST00000413110 372 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 MICF-203ENST00000432679 129 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.33□□□□□ -2.2
SNRNP200O75643 RPS15AP27-201ENST00000449183 343 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.33□□□□□ -2.2
SNRNP200O75643 AC092902.1-201ENST00000486999 259 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 AC096571.1-202ENST00000506634 735 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 TRAV11-201ENST00000539512 339 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.33□□□□□ -2.2
SNRNP200O75643 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.33□□□□□ -2.2
SNRNP200O75643 AL096840.1-201ENST00000603287 93 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SNRNP200O75643 AC091932.3-201ENST00000624223 323 ntBASIC1.33□□□□□ -2.2
SNRNP200O75643 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.32□□□□□ -2.2
SNRNP200O75643 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.32□□□□□ -2.2
SNRNP200O75643 AC092047.1-201ENST00000424997 240 ntBASIC1.32□□□□□ -2.2
SNRNP200O75643 MTND4LP14-201ENST00000429447 288 ntBASIC1.32□□□□□ -2.2
SNRNP200O75643 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.32□□□□□ -2.2
SNRNP200O75643 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.32□□□□□ -2.2
SNRNP200O75643 RPL23AP16-201ENST00000441715 421 ntBASIC1.32□□□□□ -2.2
SNRNP200O75643 Z73417.1-201ENST00000447373 778 ntBASIC1.32□□□□□ -2.2
SNRNP200O75643 AL050341.1-201ENST00000447743 313 ntBASIC1.32□□□□□ -2.2
SNRNP200O75643 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.32□□□□□ -2.2
SNRNP200O75643 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.32□□□□□ -2.2
SNRNP200O75643 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.32□□□□□ -2.2
SNRNP200O75643 SNORA70.16-201ENST00000516390 95 ntBASIC1.32□□□□□ -2.2
SNRNP200O75643 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.32□□□□□ -2.2
SNRNP200O75643 AC023813.2-201ENST00000564321 469 ntBASIC1.32□□□□□ -2.2
SNRNP200O75643 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.32□□□□□ -2.2
SNRNP200O75643 AC025165.5-201ENST00000602802 578 ntBASIC1.32□□□□□ -2.2
SNRNP200O75643 AC097504.2-201ENST00000608088 454 ntBASIC1.32□□□□□ -2.2
SNRNP200O75643 AC006213.4-201ENST00000616184 634 ntBASIC1.32□□□□□ -2.2
SNRNP200O75643 AL353770.2-201ENST00000620024 78 ntBASIC1.32□□□□□ -2.2
SNRNP200O75643 AL356585.4-201ENST00000623078 1229 ntBASIC1.32□□□□□ -2.2
SNRNP200O75643 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SNRNP200O75643 RNU6-14P-201ENST00000384630 106 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 MIR320A-201ENST00000385302 82 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 RNU4-27P-201ENST00000410889 139 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 ZNF90P2-204ENST00000419323 1075 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 RPL7L1P10-201ENST00000427790 463 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 RAB11AP1-201ENST00000442978 646 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.31□□□□□ -2.2
SNRNP200O75643 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
SNRNP200O75643 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.31□□□□□ -2.2
SNRNP200O75643 RPL12P25-201ENST00000455592 494 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 RNU1-123P-201ENST00000458950 160 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 CABYRP1-201ENST00000465493 1045 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 RPS27P26-201ENST00000494583 239 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.31□□□□□ -2.2
SNRNP200O75643 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 RNU5A-7P-201ENST00000515979 116 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 SNORA31.25-201ENST00000517242 134 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 HSPE1P3-201ENST00000559254 309 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.31□□□□□ -2.2
SNRNP200O75643 AL157834.3-201ENST00000615543 103 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.31□□□□□ -2.2
SNRNP200O75643 RNA5SP258-201ENST00000362750 119 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 RNU6-989P-201ENST00000362756 107 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 AC016769.3-201ENST00000396562 315 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 MTCO2P31-201ENST00000402702 684 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 PGBD4P6-201ENST00000421501 610 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 AL513185.2-201ENST00000425543 193 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 AL009174.1-201ENST00000426577 416 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 AL929288.2-201ENST00000446368 407 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 MTCO1P48-201ENST00000448024 1096 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.31□□□□□ -2.2
SNRNP200O75643 AC027575.1-201ENST00000481064 460 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 AC034222.1-201ENST00000494052 532 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.31□□□□□ -2.2
SNRNP200O75643 RNU6-1095P-201ENST00000516148 108 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.31□□□□□ -2.2
SNRNP200O75643 MIR3198-2-201ENST00000577868 80 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SNRNP200O75643 AL355297.2-201ENST00000604792 129 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 AC080078.3-201ENST00000605407 463 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SNRNP200O75643 HPVC1-201ENST00000629899 1198 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 U6.107-201ENST00000637108 79 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 U6.101-201ENST00000637707 76 ntBASIC1.31□□□□□ -2.2
SNRNP200O75643 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SNRNP200O75643 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SNRNP200O75643 AL033519.2-201ENST00000403958 392 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms