Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
GFRA3O60609 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.36□□□□□ -1.55
GFRA3O60609 RNU6-281P-201ENST00000384212 103 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 MIR15B-201ENST00000385045 98 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
GFRA3O60609 RNU11-4P-201ENST00000391149 133 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 UBA52P6-201ENST00000399822 382 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 MIR888-201ENST00000401186 77 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.36□□□□□ -1.55
GFRA3O60609 GSTM5P1-201ENST00000434751 660 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 EEF1A1P1-201ENST00000447052 739 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 SNORA84-201ENST00000459229 133 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 RPL23AP45-201ENST00000476406 468 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 RNU6-390P-201ENST00000516259 103 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 MIR2117-201ENST00000516780 80 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 MIR4782-201ENST00000577987 79 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 AC091042.1-201ENST00000579213 173 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 AC005296.1-201ENST00000616145 209 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 AC009831.4-201ENST00000620744 325 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 AC012640.5-201ENST00000623897 319 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 AC048347.1-201ENST00000624621 427 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 AL034408.1-202ENST00000636088 415 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
GFRA3O60609 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA3O60609 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
GFRA3O60609 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA3O60609 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA3O60609 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
GFRA3O60609 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.36□□□□□ -1.55
GFRA3O60609 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA3O60609 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.36□□□□□ -1.55
GFRA3O60609 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA3O60609 MAPK10-263ENST00000641052 4307 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA3O60609 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA3O60609 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA3O60609 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
GFRA3O60609 MAPK10-338ENST00000641647 3362 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 AL137058.3-201ENST00000624531 3099 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA3O60609 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA3O60609 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC5.35□□□□□ -1.55
GFRA3O60609 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
GFRA3O60609 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
GFRA3O60609 RNA5SP455-201ENST00000365190 119 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA3O60609 RNU6-1248P-201ENST00000391096 64 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 SNORA11.1-201ENST00000408133 129 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 RNU6-1199P-201ENST00000411249 104 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 RNU6-1001P-201ENST00000411265 100 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.35□□□□□ -1.55
GFRA3O60609 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC5.35□□□□□ -1.55
GFRA3O60609 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.35□□□□□ -1.55
GFRA3O60609 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA3O60609 RPS26P45-201ENST00000471748 340 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 AC098583.1-201ENST00000480875 255 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 RPL23AP49-201ENST00000492925 468 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.35□□□□□ -1.55
GFRA3O60609 RNA5SP490-201ENST00000517141 136 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.35□□□□□ -1.55
GFRA3O60609 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.35□□□□□ -1.55
GFRA3O60609 AC126615.2-201ENST00000553003 515 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 MIR4504-201ENST00000577413 92 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
GFRA3O60609 AL445567.2-201ENST00000618935 498 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 AC090617.7-201ENST00000623952 126 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 AC034229.5-201ENST00000624258 185 ntBASIC5.35□□□□□ -1.55
GFRA3O60609 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.35□□□□□ -1.55
GFRA3O60609 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA3O60609 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA3O60609 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA3O60609 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.35□□□□□ -1.55
GFRA3O60609 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA3O60609 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.35□□□□□ -1.55
GFRA3O60609 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA3O60609 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA3O60609 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GFRA3O60609 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA3O60609 AC138915.1-201ENST00000565427 1685 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 AC016745.2-201ENST00000608834 3443 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA3O60609 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
GFRA3O60609 SNORD115-32-201ENST00000364079 82 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 Y_RNA.346-201ENST00000365385 112 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 SNORA16A-201ENST00000384342 137 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 SNORA8.3-201ENST00000384679 139 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 RN7SKP100-201ENST00000411258 284 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 PPP1R11P2-201ENST00000423543 382 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 AL358472.1-201ENST00000431295 329 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 TMEM183AP1-205ENST00000432739 290 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.34□□□□□ -1.55
GFRA3O60609 AC097484.1-201ENST00000471148 389 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.34□□□□□ -1.55
GFRA3O60609 AK3P2-201ENST00000507976 429 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 APOOP4-201ENST00000513530 597 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 RN7SKP19-201ENST00000516016 252 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 RNU6-504P-201ENST00000516568 104 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 SCARNA13-201ENST00000516672 275 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 IGKV1-32-201ENST00000519290 311 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 AC084851.1-201ENST00000529105 249 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms