Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.99□□□□□ -2.09
SGCEO43556 MIR3199-1-201ENST00000582434 88 ntBASIC1.99□□□□□ -2.09
SGCEO43556 AC002545.1-201ENST00000592511 181 ntBASIC1.99□□□□□ -2.09
SGCEO43556 DNAJC19P3-201ENST00000594491 331 ntBASIC1.99□□□□□ -2.09
SGCEO43556 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.99□□□□□ -2.09
SGCEO43556 AC007349.4-201ENST00000608114 532 ntBASIC1.99□□□□□ -2.09
SGCEO43556 AC239868.4-201ENST00000608318 671 ntBASIC1.99□□□□□ -2.09
SGCEO43556 AL354696.1-201ENST00000614652 497 ntBASIC1.99□□□□□ -2.09
SGCEO43556 AC098657.3-201ENST00000620434 263 ntBASIC1.99□□□□□ -2.09
SGCEO43556 AC010889.1-201ENST00000566193 2666 ntBASIC1.99□□□□□ -2.09
SGCEO43556 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.98□□□□□ -2.09
SGCEO43556 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SGCEO43556 SNORA16B-201ENST00000364674 135 ntBASIC1.98□□□□□ -2.09
SGCEO43556 SNORA23-201ENST00000365128 182 ntBASIC1.98□□□□□ -2.09
SGCEO43556 RNU6-359P-201ENST00000365466 108 ntBASIC1.98□□□□□ -2.09
SGCEO43556 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SGCEO43556 RPL23AP29-201ENST00000397284 453 ntBASIC1.98□□□□□ -2.09
SGCEO43556 AL591416.1-201ENST00000404015 867 ntBASIC1.98□□□□□ -2.09
SGCEO43556 AL356379.1-201ENST00000414105 126 ntBASIC1.98□□□□□ -2.09
SGCEO43556 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.98□□□□□ -2.09
SGCEO43556 CYCSP48-201ENST00000417124 323 ntBASIC1.98□□□□□ -2.09
SGCEO43556 FO393414.1-201ENST00000428697 1184 ntBASIC1.98□□□□□ -2.09
SGCEO43556 MTND1P9-201ENST00000453775 944 ntBASIC1.98□□□□□ -2.09
SGCEO43556 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.98□□□□□ -2.09
SGCEO43556 MTCO2P9-201ENST00000503214 694 ntBASIC1.98□□□□□ -2.09
SGCEO43556 AC026414.1-201ENST00000504046 698 ntBASIC1.98□□□□□ -2.09
SGCEO43556 AC069306.1-201ENST00000507006 843 ntBASIC1.98□□□□□ -2.09
SGCEO43556 AC008413.1-201ENST00000511864 177 ntBASIC1.98□□□□□ -2.09
SGCEO43556 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
SGCEO43556 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.98□□□□□ -2.09
SGCEO43556 NACAP3-201ENST00000552100 481 ntBASIC1.98□□□□□ -2.09
SGCEO43556 AC078814.3-201ENST00000553036 491 ntBASIC1.98□□□□□ -2.09
SGCEO43556 AL359212.1-201ENST00000556608 614 ntBASIC1.98□□□□□ -2.09
SGCEO43556 VN1R87P-201ENST00000596706 487 ntBASIC1.98□□□□□ -2.09
SGCEO43556 AC107214.2-201ENST00000608204 634 ntBASIC1.98□□□□□ -2.09
SGCEO43556 AL161423.1-201ENST00000613700 262 ntBASIC1.98□□□□□ -2.09
SGCEO43556 AL118556.2-201ENST00000614375 824 ntBASIC1.98□□□□□ -2.09
SGCEO43556 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SGCEO43556 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.98□□□□□ -2.09
SGCEO43556 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.98□□□□□ -2.09
SGCEO43556 CDR1-202ENST00000625883 1485 ntBASIC1.98□□□□□ -2.09
SGCEO43556 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SGCEO43556 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.98□□□□□ -2.09
SGCEO43556 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SGCEO43556 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SGCEO43556 FAM133CP-201ENST00000332869 704 ntBASIC1.97□□□□□ -2.09
SGCEO43556 RNU6-236P-201ENST00000363886 106 ntBASIC1.97□□□□□ -2.09
SGCEO43556 Y_RNA.234-201ENST00000364409 97 ntBASIC1.97□□□□□ -2.09
SGCEO43556 OR5H15-201ENST00000383696 930 ntBASIC1.97□□□□□ -2.09
SGCEO43556 MCTS2P-201ENST00000394552 546 ntBASIC1.97□□□□□ -2.09
SGCEO43556 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SGCEO43556 RNU2-40P-201ENST00000410833 196 ntBASIC1.97□□□□□ -2.09
SGCEO43556 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.97□□□□□ -2.09
SGCEO43556 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.97□□□□□ -2.09
SGCEO43556 BPY2DP-201ENST00000422208 265 ntBASIC1.97□□□□□ -2.09
SGCEO43556 UBE2D3P3-201ENST00000426992 425 ntBASIC1.97□□□□□ -2.09
SGCEO43556 AC098831.1-201ENST00000440661 216 ntBASIC1.97□□□□□ -2.09
SGCEO43556 MTND2P20-201ENST00000440805 661 ntBASIC1.97□□□□□ -2.09
SGCEO43556 HIGD1AP2-201ENST00000446367 280 ntBASIC1.97□□□□□ -2.09
SGCEO43556 AL096829.2-201ENST00000446582 742 ntBASIC1.97□□□□□ -2.09
SGCEO43556 AC244505.3-201ENST00000454598 187 ntBASIC1.97□□□□□ -2.09
SGCEO43556 AC128713.1-201ENST00000471495 306 ntBASIC1.97□□□□□ -2.09
SGCEO43556 AL160314.1-201ENST00000490836 438 ntBASIC1.97□□□□□ -2.09
SGCEO43556 AC098799.1-201ENST00000504752 800 ntBASIC1.97□□□□□ -2.09
SGCEO43556 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.97□□□□□ -2.09
SGCEO43556 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.97□□□□□ -2.09
SGCEO43556 RNA5SP281-201ENST00000516504 135 ntBASIC1.97□□□□□ -2.09
SGCEO43556 HMGN1P28-201ENST00000521340 364 ntBASIC1.97□□□□□ -2.09
SGCEO43556 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SGCEO43556 OR8K2P-201ENST00000524645 927 ntBASIC1.97□□□□□ -2.09
SGCEO43556 MTCO3P15-201ENST00000526563 574 ntBASIC1.97□□□□□ -2.09
SGCEO43556 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.97□□□□□ -2.09
SGCEO43556 CYCSP26-201ENST00000534107 320 ntBASIC1.97□□□□□ -2.09
SGCEO43556 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.97□□□□□ -2.09
SGCEO43556 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.97□□□□□ -2.09
SGCEO43556 AC005951.2-201ENST00000576282 495 ntBASIC1.97□□□□□ -2.09
SGCEO43556 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.97□□□□□ -2.09
SGCEO43556 AF131215.7-201ENST00000602443 707 ntBASIC1.97□□□□□ -2.09
SGCEO43556 AL021997.1-201ENST00000605757 193 ntBASIC1.97□□□□□ -2.09
SGCEO43556 AL589743.7-201ENST00000612637 233 ntBASIC1.97□□□□□ -2.09
SGCEO43556 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
SGCEO43556 AL357080.1-201ENST00000617394 239 ntBASIC1.97□□□□□ -2.09
SGCEO43556 AL138713.1-201ENST00000624026 2130 ntBASIC1.97□□□□□ -2.09
SGCEO43556 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SGCEO43556 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.96□□□□□ -2.1
SGCEO43556 RNA5SP289-201ENST00000362332 137 ntBASIC1.96□□□□□ -2.1
SGCEO43556 CCNG1P1-201ENST00000406783 885 ntBASIC1.96□□□□□ -2.1
SGCEO43556 NDUFS5P4-201ENST00000412983 318 ntBASIC1.96□□□□□ -2.1
SGCEO43556 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.96□□□□□ -2.1
SGCEO43556 TPMTP2-201ENST00000414372 726 ntBASIC1.96□□□□□ -2.1
SGCEO43556 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.96□□□□□ -2.1
SGCEO43556 AC018634.1-201ENST00000437554 401 ntBASIC1.96□□□□□ -2.1
SGCEO43556 GPM6BP3-201ENST00000442797 145 ntBASIC1.96□□□□□ -2.1
SGCEO43556 ARPC3P5-201ENST00000448802 534 ntBASIC1.96□□□□□ -2.1
SGCEO43556 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.96□□□□□ -2.1
SGCEO43556 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.96□□□□□ -2.1
SGCEO43556 AC080013.2-201ENST00000460866 323 ntBASIC1.96□□□□□ -2.1
SGCEO43556 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.96□□□□□ -2.1
SGCEO43556 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.96□□□□□ -2.1
SGCEO43556 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms