Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.54□□□□□ -2.16
SDCBPO00560 MTND4P27-201ENST00000450813 1354 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SDCBPO00560 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SDCBPO00560 AC007785.2-201ENST00000598627 1916 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SDCBPO00560 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SDCBPO00560 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
SDCBPO00560 RNU6-492P-201ENST00000363035 104 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 GSTA9P-201ENST00000406231 611 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 AC023141.4-201ENST00000412031 328 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.53□□□□□ -2.16
SDCBPO00560 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.53□□□□□ -2.16
SDCBPO00560 AC018630.2-202ENST00000422992 927 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 AL590233.1-201ENST00000430017 456 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.53□□□□□ -2.16
SDCBPO00560 PSPHP1-201ENST00000450062 261 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 FABP5P13-201ENST00000452144 328 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 MTND2P30-201ENST00000456663 382 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SDCBPO00560 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.53□□□□□ -2.16
SDCBPO00560 RNU7-193P-201ENST00000516723 65 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 BTF3P12-201ENST00000519620 469 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.53□□□□□ -2.16
SDCBPO00560 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.53□□□□□ -2.16
SDCBPO00560 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.53□□□□□ -2.16
SDCBPO00560 AC087465.1-201ENST00000560574 245 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 AC090897.2-201ENST00000581715 130 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 AP002906.1-201ENST00000603405 233 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 RPP40P2-201ENST00000603596 712 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 AP003973.1-201ENST00000604639 691 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 AC004853.1-201ENST00000604902 698 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 AP000238.1-201ENST00000608759 426 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 HPVC1-201ENST00000629899 1198 ntBASIC1.53□□□□□ -2.16
SDCBPO00560 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.52□□□□□ -2.17
SDCBPO00560 SUGT1P1-201ENST00000379514 476 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AL079342.1-201ENST00000401460 267 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 BX664727.1-201ENST00000416024 466 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 PPP1R11P2-201ENST00000423543 382 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AC019178.2-201ENST00000423595 505 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AC092047.1-201ENST00000424997 240 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AL049734.2-201ENST00000441066 616 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 OSTCP8-201ENST00000445117 448 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.52□□□□□ -2.17
SDCBPO00560 TPT1P14-201ENST00000448018 505 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.52□□□□□ -2.17
SDCBPO00560 SUMO2P2-201ENST00000456482 255 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 DYNLL1P5-201ENST00000467158 270 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 RPS29P21-201ENST00000496272 170 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AC093677.1-201ENST00000514414 678 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 SCARNA15.2-201ENST00000516409 127 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 SCARNA11.3-201ENST00000517276 130 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.52□□□□□ -2.17
SDCBPO00560 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.52□□□□□ -2.17
SDCBPO00560 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.52□□□□□ -2.17
SDCBPO00560 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.52□□□□□ -2.17
SDCBPO00560 AC124947.2-202ENST00000552735 133 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AL132857.1-201ENST00000555180 708 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.52□□□□□ -2.17
SDCBPO00560 AL731537.2-201ENST00000561565 951 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AC005951.2-201ENST00000576282 495 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 BNIP3P24-201ENST00000593398 557 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.52□□□□□ -2.17
SDCBPO00560 AL022067.1-201ENST00000602426 454 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AC021749.1-201ENST00000604322 607 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AL450336.1-201ENST00000605180 586 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AC004067.1-201ENST00000608733 700 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.52□□□□□ -2.17
SDCBPO00560 MIR8084-201ENST00000614105 89 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 AC097460.3-201ENST00000623099 442 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SDCBPO00560 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
SDCBPO00560 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SDCBPO00560 DBF4P1-201ENST00000412976 1892 ntBASIC1.52□□□□□ -2.17
SDCBPO00560 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SDCBPO00560 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.51□□□□□ -2.17
SDCBPO00560 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
SDCBPO00560 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.51□□□□□ -2.17
SDCBPO00560 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
SDCBPO00560 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SDCBPO00560 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.51□□□□□ -2.17
SDCBPO00560 U6.112-201ENST00000384129 70 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 RNU6-217P-201ENST00000384164 104 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 SNORA70B-201ENST00000384210 135 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 HMGB1P17-201ENST00000403495 628 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.51□□□□□ -2.17
SDCBPO00560 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.51□□□□□ -2.17
SDCBPO00560 ZNF90P2-204ENST00000419323 1075 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SDCBPO00560 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.51□□□□□ -2.17
SDCBPO00560 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.51□□□□□ -2.17
SDCBPO00560 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.51□□□□□ -2.17
SDCBPO00560 Z80107.1-201ENST00000436830 412 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.51□□□□□ -2.17
SDCBPO00560 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.51□□□□□ -2.17
SDCBPO00560 RNA5SP233-201ENST00000459153 113 ntBASIC1.51□□□□□ -2.17
SDCBPO00560 MRPS17P3-201ENST00000465453 385 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms