Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL121601.2-201ENST00000438019 707 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 RPL23AP20-201ENST00000447965 421 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN3O00409 U8.18-201ENST00000459285 133 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 AC126389.1-201ENST00000477436 290 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 AC012181.1-201ENST00000479895 423 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 AC069439.1-201ENST00000494739 167 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 HSPD1P15-201ENST00000505573 1122 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 AC108078.2-201ENST00000510750 236 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 TTC39CP1-201ENST00000512513 755 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 SCARNA15.2-201ENST00000516409 127 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN3O00409 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN3O00409 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN3O00409 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN3O00409 AP003034.1-201ENST00000534621 422 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXN3O00409 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN3O00409 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN3O00409 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN3O00409 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN3O00409 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXN3O00409 MIR3160-1-201ENST00000577972 85 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN3O00409 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXN3O00409 AC093648.1-201ENST00000623546 606 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 AP000553.6-201ENST00000641242 118 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 AL732372.2-225ENST00000642124 456 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXN3O00409 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
FOXN3O00409 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXN3O00409 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXN3O00409 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXN3O00409 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
FOXN3O00409 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
FOXN3O00409 AC008568.2-201ENST00000623862 2313 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXN3O00409 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXN3O00409 RNU6-694P-201ENST00000364071 147 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 RN7SKP280-201ENST00000364196 304 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
FOXN3O00409 Y_RNA.450-201ENST00000384198 113 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 SNORA24.1-201ENST00000384401 135 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXN3O00409 U3.42-201ENST00000408746 214 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXN3O00409 AL590383.1-201ENST00000428602 75 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 HMGB3P12-201ENST00000438745 556 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXN3O00409 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXN3O00409 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXN3O00409 RPL37P6-201ENST00000460682 294 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 RN7SL132P-201ENST00000478131 296 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXN3O00409 AC026402.1-201ENST00000513642 170 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXN3O00409 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXN3O00409 RN7SKP258-201ENST00000517151 304 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 AC103843.2-201ENST00000530523 682 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 OR5B19P-201ENST00000531766 928 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 OR5B10P-201ENST00000532869 642 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXN3O00409 AK6P1-201ENST00000540219 478 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.91□□□□□ -1.78
FOXN3O00409 AC004024.1-201ENST00000549244 247 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 AL163153.1-201ENST00000554223 283 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.91□□□□□ -1.78
FOXN3O00409 AL359212.1-201ENST00000556608 614 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXN3O00409 AC034105.3-201ENST00000565294 442 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXN3O00409 MIR4474-201ENST00000579189 78 ntBASIC3.91□□□□□ -1.78
FOXN3O00409 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXN3O00409 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXN3O00409 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXN3O00409 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXN3O00409 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
FOXN3O00409 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
FOXN3O00409 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.9□□□□□ -1.78
FOXN3O00409 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
FOXN3O00409 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
FOXN3O00409 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
FOXN3O00409 Y_RNA.126-201ENST00000363382 111 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 RN7SKP227-201ENST00000364445 330 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
FOXN3O00409 RNU6-190P-201ENST00000384154 102 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 Y_RNA.453-201ENST00000384223 109 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 MIR325-201ENST00000385260 98 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 MIR1193-201ENST00000408109 78 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 BX842559.1-201ENST00000419615 532 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 UBE2D3P2-201ENST00000424409 445 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXN3O00409 RNU7-63P-201ENST00000459054 62 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 MRPS17P3-201ENST00000465453 385 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 AC019235.1-201ENST00000503847 207 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.9□□□□□ -1.79
FOXN3O00409 ARL4AP2-201ENST00000507378 601 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXN3O00409 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms