Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.02□□□□□ -2.09
UPK1AO00322 Z82209.1-201ENST00000422141 2135 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
UPK1AO00322 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
UPK1AO00322 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
UPK1AO00322 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
UPK1AO00322 AL161781.1-201ENST00000354277 403 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 MIR524-201ENST00000385242 87 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 AL590084.1-201ENST00000407885 387 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 AC068533.2-201ENST00000411872 306 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 TPMTP3-201ENST00000411928 735 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 TIMM9P2-201ENST00000419324 266 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 ZNF863P-201ENST00000426746 417 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 Z80107.1-201ENST00000436830 412 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.01□□□□□ -2.09
UPK1AO00322 BNIP3P2-201ENST00000441221 577 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 EEF1B2P7-201ENST00000451177 676 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 SNORD121B-201ENST00000458838 81 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 AC097493.1-201ENST00000463958 372 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 RPL30P9-201ENST00000465586 330 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 UBE2DNL-203ENST00000474922 222 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 SUMO2P6-201ENST00000505273 288 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 AC113347.3-201ENST00000509113 148 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 AC006499.2-201ENST00000513470 337 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.01□□□□□ -2.09
UPK1AO00322 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.01□□□□□ -2.09
UPK1AO00322 AC112198.4-201ENST00000515450 351 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
UPK1AO00322 ATP5F1P5-201ENST00000526403 760 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.01□□□□□ -2.09
UPK1AO00322 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.01□□□□□ -2.09
UPK1AO00322 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.01□□□□□ -2.09
UPK1AO00322 AC026464.5-201ENST00000562497 722 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 AC009063.1-201ENST00000563342 702 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 AL132657.2-201ENST00000564417 358 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 SNORD53-201ENST00000579969 78 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 AC002545.1-201ENST00000592511 181 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
UPK1AO00322 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.01□□□□□ -2.09
UPK1AO00322 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
UPK1AO00322 CCT4P2-201ENST00000233836 1548 ntBASIC2.01□□□□□ -2.09
UPK1AO00322 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2□□□□□ -2.09
UPK1AO00322 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2□□□□□ -2.09
UPK1AO00322 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
UPK1AO00322 DDX10P1-201ENST00000448545 1933 ntBASIC2□□□□□ -2.09
UPK1AO00322 HSPE1P11-201ENST00000339579 310 ntBASIC2□□□□□ -2.09
UPK1AO00322 OR56A5-201ENST00000340110 738 ntBASIC2□□□□□ -2.09
UPK1AO00322 RNU6-359P-201ENST00000365466 108 ntBASIC2□□□□□ -2.09
UPK1AO00322 U3.20-201ENST00000390909 217 ntBASIC2□□□□□ -2.09
UPK1AO00322 RNU6-952P-201ENST00000391164 108 ntBASIC2□□□□□ -2.09
UPK1AO00322 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2□□□□□ -2.09
UPK1AO00322 AC019070.1-201ENST00000415008 1024 ntBASIC2□□□□□ -2.09
UPK1AO00322 BX119904.4-201ENST00000424402 301 ntBASIC2□□□□□ -2.09
UPK1AO00322 AC092047.1-201ENST00000424997 240 ntBASIC2□□□□□ -2.09
UPK1AO00322 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2□□□□□ -2.09
UPK1AO00322 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2□□□□□ -2.09
UPK1AO00322 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2□□□□□ -2.09
UPK1AO00322 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2□□□□□ -2.09
UPK1AO00322 MTND1P9-201ENST00000453775 944 ntBASIC2□□□□□ -2.09
UPK1AO00322 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2□□□□□ -2.09
UPK1AO00322 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2□□□□□ -2.09
UPK1AO00322 SNORA31.18-201ENST00000517043 134 ntBASIC2□□□□□ -2.09
UPK1AO00322 AC005832.3-201ENST00000537929 631 ntBASIC2□□□□□ -2.09
UPK1AO00322 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2□□□□□ -2.09
UPK1AO00322 AL391261.3-201ENST00000557194 520 ntBASIC2□□□□□ -2.09
UPK1AO00322 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2□□□□□ -2.09
UPK1AO00322 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2□□□□□ -2.09
UPK1AO00322 AL512347.1-201ENST00000566420 503 ntBASIC2□□□□□ -2.09
UPK1AO00322 MIR3117-201ENST00000584034 78 ntBASIC2□□□□□ -2.09
UPK1AO00322 HMGN2P15-201ENST00000585707 270 ntBASIC2□□□□□ -2.09
UPK1AO00322 AC103710.4-201ENST00000609301 899 ntBASIC2□□□□□ -2.09
UPK1AO00322 AC009268.2-201ENST00000621925 457 ntBASIC2□□□□□ -2.09
UPK1AO00322 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
UPK1AO00322 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2□□□□□ -2.09
UPK1AO00322 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2□□□□□ -2.09
UPK1AO00322 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2□□□□□ -2.09
UPK1AO00322 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2□□□□□ -2.09
UPK1AO00322 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UPK1AO00322 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
UPK1AO00322 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.99□□□□□ -2.09
UPK1AO00322 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UPK1AO00322 RNU6-461P-201ENST00000364195 107 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 SNORA23-201ENST00000365128 182 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
UPK1AO00322 RNU6-217P-201ENST00000384164 104 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 RNU6-1207P-201ENST00000384343 107 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 RNU6-140P-201ENST00000384566 108 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 Y_RNA.548-201ENST00000384656 105 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 TAS2R15P-201ENST00000390674 928 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 AL356421.1-201ENST00000403255 413 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.99□□□□□ -2.09
UPK1AO00322 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.99□□□□□ -2.09
UPK1AO00322 MYL8P-204ENST00000431574 518 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK1AO00322 AC236972.1-201ENST00000433225 199 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 GTF2IP3-201ENST00000433887 494 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 AL445687.1-201ENST00000439946 251 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms