Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF223E7ERA6 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF223E7ERA6 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF223E7ERA6 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 C4BPAP1-201ENST00000415474 1893 ntBASIC4.98□□□□□ -1.61
RNF223E7ERA6 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.98□□□□□ -1.61
RNF223E7ERA6 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF223E7ERA6 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF223E7ERA6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF223E7ERA6 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF223E7ERA6 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF223E7ERA6 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 RNU1-62P-201ENST00000362599 164 ntBASIC4.98□□□□□ -1.61
RNF223E7ERA6 RNU6-727P-201ENST00000363592 107 ntBASIC4.98□□□□□ -1.61
RNF223E7ERA6 RNA5SP500-201ENST00000364486 119 ntBASIC4.98□□□□□ -1.61
RNF223E7ERA6 Y_RNA.281-201ENST00000364774 94 ntBASIC4.98□□□□□ -1.61
RNF223E7ERA6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF223E7ERA6 Y_RNA.456-201ENST00000384232 111 ntBASIC4.98□□□□□ -1.61
RNF223E7ERA6 AC005042.1-201ENST00000393397 800 ntBASIC4.98□□□□□ -1.61
RNF223E7ERA6 AC016739.1-201ENST00000405359 345 ntBASIC4.98□□□□□ -1.61
RNF223E7ERA6 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 SPTLC1P2-201ENST00000407089 121 ntBASIC4.98□□□□□ -1.61
RNF223E7ERA6 AC007969.2-201ENST00000441891 191 ntBASIC4.98□□□□□ -1.61
RNF223E7ERA6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 SNORA43.3-201ENST00000517240 103 ntBASIC4.98□□□□□ -1.61
RNF223E7ERA6 HMGN2P36-201ENST00000529541 409 ntBASIC4.98□□□□□ -1.61
RNF223E7ERA6 CYCSP39-201ENST00000565821 309 ntBASIC4.98□□□□□ -1.61
RNF223E7ERA6 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF223E7ERA6 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF223E7ERA6 AC022336.2-201ENST00000568966 2538 ntBASIC4.98□□□□□ -1.61
RNF223E7ERA6 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF223E7ERA6 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF223E7ERA6 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF223E7ERA6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF223E7ERA6 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF223E7ERA6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
RNF223E7ERA6 BIN2P1-201ENST00000504996 1530 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF223E7ERA6 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF223E7ERA6 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF223E7ERA6 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF223E7ERA6 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF223E7ERA6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF223E7ERA6 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF223E7ERA6 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RNF223E7ERA6 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF223E7ERA6 AC073073.2-201ENST00000609827 2578 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF223E7ERA6 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RNF223E7ERA6 AC092268.1-201ENST00000342691 405 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 SNORD115-30-201ENST00000364117 82 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 RNU6-173P-201ENST00000364215 104 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 Y_RNA.328-201ENST00000365208 113 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 Y_RNA.341-201ENST00000365341 102 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 RNU6-756P-201ENST00000383997 107 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 RNU4-34P-201ENST00000410431 124 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 CYP4F29P-201ENST00000420685 446 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 AC078809.1-201ENST00000427601 140 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 AL356867.1-201ENST00000429623 299 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF223E7ERA6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF223E7ERA6 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RNF223E7ERA6 AC067852.5-201ENST00000589299 310 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 AC019159.1-201ENST00000605094 187 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 AC025166.1-201ENST00000612411 163 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 RN7SL544P-201ENST00000617232 284 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 RN7SL763P-201ENST00000620922 284 ntBASIC4.97□□□□□ -1.61
RNF223E7ERA6 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
RNF223E7ERA6 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF223E7ERA6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF223E7ERA6 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RNF223E7ERA6 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF223E7ERA6 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RNF223E7ERA6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF223E7ERA6 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF223E7ERA6 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF223E7ERA6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF223E7ERA6 TNPO1P2-201ENST00000426249 2665 ntBASIC4.96□□□□□ -1.62
RNF223E7ERA6 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RNF223E7ERA6 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RNF223E7ERA6 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms