Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 PSMA3P-201ENST00000555485 635 ntBASIC4.47□□□□□ -1.69
PTPDC1A2A3K4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.47□□□□□ -1.69
PTPDC1A2A3K4 AC087499.8-201ENST00000578406 226 ntBASIC4.47□□□□□ -1.69
PTPDC1A2A3K4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.47□□□□□ -1.69
PTPDC1A2A3K4 AL121757.2-201ENST00000611223 313 ntBASIC4.47□□□□□ -1.69
PTPDC1A2A3K4 AC010133.1-201ENST00000615809 842 ntBASIC4.47□□□□□ -1.69
PTPDC1A2A3K4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PTPDC1A2A3K4 AC015967.1-201ENST00000619893 476 ntBASIC4.47□□□□□ -1.69
PTPDC1A2A3K4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPDC1A2A3K4 MTND4P35-201ENST00000604257 1375 ntBASIC4.47□□□□□ -1.69
PTPDC1A2A3K4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
PTPDC1A2A3K4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTPDC1A2A3K4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.47□□□□□ -1.69
PTPDC1A2A3K4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTPDC1A2A3K4 AC103710.2-202ENST00000641454 2853 ntBASIC4.47□□□□□ -1.69
PTPDC1A2A3K4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PTPDC1A2A3K4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.46□□□□□ -1.69
PTPDC1A2A3K4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 Y_RNA.100-201ENST00000363141 102 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 RNU6-701P-201ENST00000384059 107 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 Y_RNA.535-201ENST00000384612 99 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 RNU6-1148P-201ENST00000410992 104 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 RAB9AP3-201ENST00000412737 573 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 AL645937.1-202ENST00000421799 937 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 AC008850.1-201ENST00000427546 362 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 CALM2P2-201ENST00000428512 440 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 IFNA20P-201ENST00000436840 528 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 RAB9AP1-201ENST00000449393 573 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 AC098591.2-201ENST00000510152 315 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 RNU7-30P-201ENST00000516835 62 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 SNORA31.22-201ENST00000517204 135 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 NARSP2-201ENST00000518524 679 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 AC008489.1-201ENST00000524271 483 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 AL137849.1-201ENST00000604767 169 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 BRDTP1-201ENST00000605735 677 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 HMGB1P50-201ENST00000605814 607 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 uc_338.5-201ENST00000611839 155 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 uc_338.34-201ENST00000617467 174 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 AC007998.5-201ENST00000622938 237 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 AC005858.4-201ENST00000623191 700 ntBASIC4.46□□□□□ -1.7
PTPDC1A2A3K4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 U3.15-201ENST00000365398 212 ntBASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 RNU4-46P-201ENST00000410818 138 ntBASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 MTND3P8-201ENST00000412909 339 ntBASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 RPL7P46-201ENST00000425129 740 ntBASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 SNORA71B-202ENST00000439232 272 ntBASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 Y_RNA.665-201ENST00000516177 98 ntBASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 AC022695.1-201ENST00000522089 237 ntBASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 MTND4P7-201ENST00000523876 130 ntBASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 AP004371.1-201ENST00000525240 214 ntBASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 AL137161.1-201ENST00000532231 390 ntBASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 CBX3P7-201ENST00000532876 502 ntBASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 AC107016.1-201ENST00000550463 337 ntBASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 AL132765.2-201ENST00000610812 351 ntBASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 SDR42E1P2-201ENST00000614861 481 ntBASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.45□□□□□ -1.7
PTPDC1A2A3K4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.44□□□□□ -1.7
PTPDC1A2A3K4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.44□□□□□ -1.7
PTPDC1A2A3K4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PTPDC1A2A3K4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPDC1A2A3K4 TPTE2P4-201ENST00000258589 1605 ntBASIC4.44□□□□□ -1.7
PTPDC1A2A3K4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTPDC1A2A3K4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPDC1A2A3K4 RNA5SP502-201ENST00000362694 119 ntBASIC4.44□□□□□ -1.7
PTPDC1A2A3K4 RNU1-18P-201ENST00000363062 164 ntBASIC4.44□□□□□ -1.7
PTPDC1A2A3K4 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.44□□□□□ -1.7
PTPDC1A2A3K4 RNU6-629P-201ENST00000384061 103 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms