Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 MIR3199-1-201ENST00000582434 88 ntBASIC2.3□□□□□ -2.04
COMMD3-BMI1R4GMX3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.3□□□□□ -2.04
COMMD3-BMI1R4GMX3 AL450336.1-201ENST00000605180 586 ntBASIC2.3□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC104763.3-201ENST00000613765 618 ntBASIC2.3□□□□□ -2.04
COMMD3-BMI1R4GMX3 AL603758.1-201ENST00000618654 241 ntBASIC2.3□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC123767.1-202ENST00000620407 817 ntBASIC2.3□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC002550.2-201ENST00000621246 394 ntBASIC2.3□□□□□ -2.04
COMMD3-BMI1R4GMX3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.3□□□□□ -2.04
COMMD3-BMI1R4GMX3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.3□□□□□ -2.04
COMMD3-BMI1R4GMX3 MTND1P37-201ENST00000636562 264 ntBASIC2.3□□□□□ -2.04
COMMD3-BMI1R4GMX3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.3□□□□□ -2.04
COMMD3-BMI1R4GMX3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC004944.1-201ENST00000517807 3059 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 AL390862.1-201ENST00000635467 1469 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 AL596028.1-201ENST00000326971 197 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 RNU5E-8P-201ENST00000363502 116 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 RNU6-884P-201ENST00000363889 107 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 RNU6-7-201ENST00000364784 107 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 RNU1-51P-201ENST00000365345 176 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 RNU6-8-201ENST00000365467 107 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 RNU6-298P-201ENST00000390888 96 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 AL161449.1-201ENST00000414531 1199 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 NPM1P11-201ENST00000417106 855 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 CYCSP48-201ENST00000417124 323 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 MICF-203ENST00000432679 129 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC105272.1-201ENST00000438604 198 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 RPL23AP45-201ENST00000476406 468 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC104435.1-201ENST00000483483 166 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 RNA5SP282-201ENST00000516355 108 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 AP000889.2-201ENST00000532684 490 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC005832.3-201ENST00000537929 631 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC104985.3-201ENST00000623479 597 ntBASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
COMMD3-BMI1R4GMX3 MTND4P1-201ENST00000457501 1466 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 TPMTP3-201ENST00000411928 735 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 TPMTP2-201ENST00000414372 726 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 COTL1P1-201ENST00000422309 375 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 EIF4EP4-201ENST00000424916 578 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 MED14P1-201ENST00000430517 648 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 ATP5F1P1-201ENST00000433775 569 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 GTF2IP3-201ENST00000433887 494 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC098826.1-201ENST00000433943 471 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 SNORD53-201ENST00000579969 78 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 AL451007.1-201ENST00000595491 289 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 AF131215.7-201ENST00000602443 707 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 AP000403.1-201ENST00000603349 851 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC107214.2-201ENST00000608204 634 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 AC009237.15-201ENST00000610252 501 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 ZNF658B-202ENST00000615961 3375 ntBASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
COMMD3-BMI1R4GMX3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 MIR21-201ENST00000362134 72 ntBASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 Y_RNA.111-201ENST00000363248 100 ntBASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 Y_RNA.234-201ENST00000364409 97 ntBASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 AL360182.1-201ENST00000397433 468 ntBASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 SRIP2-201ENST00000428470 166 ntBASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 AC002381.1-201ENST00000447049 280 ntBASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 RPL18AP17-201ENST00000455326 198 ntBASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 SNORD121B-201ENST00000458838 81 ntBASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 RPS29P20-201ENST00000489592 171 ntBASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
COMMD3-BMI1R4GMX3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms