Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 AC011979.2-201ENST00000527568 352 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 AC006362.1-201ENST00000567392 174 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 DPPA3P3-201ENST00000603842 430 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 AC110994.2-201ENST00000635481 492 ntBASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.43□□□□□ -1.86
LIMA1Q9UHB6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 SNORA75-201ENST00000384158 137 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 MIR325-201ENST00000385260 98 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 NDUFS5P1-201ENST00000405668 289 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 AC137499.1-201ENST00000427602 88 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 HMGN2P31-201ENST00000432430 273 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 AC005019.1-201ENST00000436455 431 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 AL031667.1-201ENST00000440222 725 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 AC244505.5-201ENST00000443639 207 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 RPL32P34-201ENST00000486380 400 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 RN7SL20P-201ENST00000488827 297 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 AC108043.1-201ENST00000512696 574 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 MTCYBP33-201ENST00000575007 1130 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 AC090578.1-201ENST00000604955 591 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 OR5H6-203ENST00000642105 978 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 AC008264.2-201ENST00000610193 3731 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 FARSBP1-201ENST00000435808 1778 ntBASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
LIMA1Q9UHB6 TPTE2P4-201ENST00000258589 1605 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 SNORA62.3-201ENST00000365110 153 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 RNU6-348P-201ENST00000384386 107 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 RNA5SP38-201ENST00000410750 119 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 RNU6-195P-201ENST00000411352 109 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 ELOCP4-201ENST00000420090 333 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AC007919.1-201ENST00000429380 217 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AC104850.1-201ENST00000435940 476 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AL353706.1-201ENST00000436728 494 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 SNORD97-201ENST00000459187 142 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AL135752.1-201ENST00000479477 471 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 RN7SL283P-201ENST00000489055 303 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AC091435.1-201ENST00000505442 584 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AC006445.2-201ENST00000510061 472 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 RNU2-10P-201ENST00000516375 211 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 BNIP3P33-201ENST00000598912 569 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AC064872.1-201ENST00000604823 1072 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 AC099778.2-201ENST00000610904 211 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 FRG1KP-201ENST00000623592 341 ntBASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LIMA1Q9UHB6 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.4□□□□□ -1.86
LIMA1Q9UHB6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.4□□□□□ -1.86
LIMA1Q9UHB6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
LIMA1Q9UHB6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 MIR134-201ENST00000385258 73 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 MIR591-201ENST00000385290 95 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 RNU2-33P-201ENST00000410344 192 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 RNU6-1077P-201ENST00000410506 102 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AC127391.1-201ENST00000411737 98 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 BTF3L4P1-201ENST00000413813 468 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 ISCA1P6-201ENST00000427740 390 ntBASIC3.4□□□□□ -1.87
LIMA1Q9UHB6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms